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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106379219   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 bna-r.1   106386550   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 bna-r.1   106433072   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 bna-r.1   106432496   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 bra-r.6   103851163   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 bra-r.6   103856285   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 bra-r.6   103828224   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 ath-u.5   AT3G03920   H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein 
 ghi-r.1   107930877   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 ghi-r.1   107962356   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 ghi-r.1   107898138   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 cit-r.1   102619891   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 gma-u.5   100788981   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 gma-u.5   100799823   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 vvi-u.5   100245323   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 ppo-u.5   7489670   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 ppo-u.5   18108236   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 mtr-u.5   25498984   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 sly-u.5   101246000   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 sot-r.1   102586015   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 nta-r.1   107805678   H/ACA ribonucleoprotein complex subunit 1-like protein 2 
 nta-r.1   107778989   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 nta-r.1   107762965   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 osa-u.5   4350782   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 zma-u.5   100193822   Putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 zma-u.5   100273853   putative H/ACA ribonucleoprotein complex subunit family protein 
 tae-r.2   123058638   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 tae-r.2   123065747   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 tae-r.2   123079348   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 hvu-r.1   123448556   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 sbi-r.1   8071965   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 bdi-r.1   100830464   putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 
 cre-r.1   CHLRE_13g567850v5   uncharacterized protein 

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Top 50 coexpressed genes to 106379219 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106379219 (bna-r.1 coexpression data)

CoexMap"106379219"


bnaLOC106379219 | Entrez gene ID : 106379219    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 1 3 1 2 1 2 1 1 1 3 1 2 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03008 [list] [network] Ribosome biogenesis in eukaryotes (6477 genes)
GO BP
GO:0000454 [list] [network] snoRNA guided rRNA pseudouridine synthesis  (7 genes)  IEA  
GO:0042254 [list] [network] ribosome biogenesis  (963 genes)  IEA  
GO CC
GO:0031429 [list] [network] box H/ACA snoRNP complex  (23 genes)  IEA  
GO MF
GO:0034513 [list] [network] box H/ACA snoRNA binding  (19 genes)  IEA  
Protein XP_013674679.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 2,  mito 2,  chlo_mito 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_013674679.2)
Subcellular
localization
TargetP
mito 7,  other 4  (predict for XP_013674679.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106379219
bna-r.1
for
106386550
bna-r.1
for
106433072
bna-r.1
for
106432496
bra-r.6
for
103851163
bra-r.6
for
103856285
bra-r.6
for
103828224
ath-u.5
for
AT3G03920
ghi-r.1
for
107930877
ghi-r.1
for
107962356
ghi-r.1
for
107898138
cit-r.1
for
102619891
gma-u.5
for
100788981
gma-u.5
for
100799823
vvi-u.5
for
100245323
ppo-u.5
for
7489670
ppo-u.5
for
18108236
mtr-u.5
for
25498984
sly-u.5
for
101246000
sot-r.1
for
102586015
nta-r.1
for
107805678
nta-r.1
for
107778989
nta-r.1
for
107762965
osa-u.5
for
4350782
zma-u.5
for
100193822
zma-u.5
for
100273853
tae-r.2
for
123058638
tae-r.2
for
123065747
tae-r.2
for
123079348
hvu-r.1
for
123448556
sbi-r.1
for
8071965
bdi-r.1
for
100830464
cre-r.1
for
CHLRE_13g567850v5


Ortholog ID: 4911
Species bna bna bna bra bra bra ath ghi ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC106386550 LOC106433072 LOC106445315 LOC103851163 LOC103856285 LOC103828224 AT3G03920 LOC107962356 LOC107898138 LOC107894589 LOC102619891 LOC100788981 LOC100799823 LOC100245323 LOC7489670 LOC18108236 LOC25498984 LOC101246000 LOC102586015 LOC107805678 LOC107778989 LOC107762965 LOC4350782 LOC100193822 LOC100273853 LOC123065747 LOC123091807 LOC123097243 LOC123448556 LOC8071965 LOC100830464 CHLRE_13g567850v5
Function* putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 H/ACA ribonucleoprotein complex, subunit Gar1/Naf1 protein putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 H/ACA ribonucleoprotein complex subunit 1-like protein 2 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 Putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit family protein putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 putative H/ACA ribonucleoprotein complex subunit 1-like protein 1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 13
bna03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 12
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 6
bna03018 RNA degradation 2
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 5
bra03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03008 Ribosome biogenesis in eukaryotes 6
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
ath03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 4
ghi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 5
gma03008 Ribosome biogenesis in eukaryotes 5
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 8
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 11
ppo03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 10
ppo03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 4
mtr03010 Ribosome 3
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 8
sly03010 Ribosome 7
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 6
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
nta03040 Spliceosome 4
nta03082 ATP-dependent chromatin remodeling 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 5
nta03082 ATP-dependent chromatin remodeling 2
nta03010 Ribosome 2
nta03040 Spliceosome 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
nta03008 Ribosome biogenesis in eukaryotes 4
nta03082 ATP-dependent chromatin remodeling 2
nta03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 3
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 7
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 9
tae03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 6
tae03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 6
hvu03008 Ribosome biogenesis in eukaryotes 4
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 6
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 8
bdi03040 Spliceosome 2
bdi03010 Ribosome 2
bdi00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 8
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106386550 106433072 106445315 103851163 103856285 103828224 821062 107962356 107898138 107894589 102619891 100788981 100799823 100245323 7489670 18108236 25498984 101246000 102586015 107805678 107778989 107762965 4350782 100193822 100273853 123065747 123091807 123097243 123448556 8071965 100830464 66055923
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