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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106382089   DExH-box ATP-dependent RNA helicase DExH3 
 ath-u.5   AT2G01130   DEA(D/H)-box RNA helicase family protein 
 ath-u.5   AT1G48650   DEA(D/H)-box RNA helicase family protein 
 gma-u.5   100808902   DExH-box ATP-dependent RNA helicase DExH5, mitochondrial 
 gma-u.5   100806141   DExH-box ATP-dependent RNA helicase DExH3 
 gma-u.5   100798684   DExH-box ATP-dependent RNA helicase DExH5, mitochondrial 
 vvi-u.5   100244105   DExH-box ATP-dependent RNA helicase DExH3 
 vvi-u.5   100264518   DExH-box ATP-dependent RNA helicase DExH5, mitochondrial 
 ppo-u.5   7453895   DExH-box ATP-dependent RNA helicase DExH3 
 ppo-u.5   7459805   DExH-box ATP-dependent RNA helicase DExH5, mitochondrial 
 mtr-u.5   11410150   DExH-box ATP-dependent RNA helicase DExH3 
 mtr-u.5   25485451   DExH-box ATP-dependent RNA helicase DExH5, mitochondrial 
 sly-u.5   101263393   DExH-box ATP-dependent RNA helicase DExH3 
 sly-u.5   101261705   DExH-box ATP-dependent RNA helicase DExH5, mitochondrial 
 osa-u.5   4326075   DExH-box ATP-dependent RNA helicase DExH3 
 zma-u.5   103649879   DExH-box ATP-dependent RNA helicase DExH3 

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Top 50 coexpressed genes to 106382089 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106382089 (bna-r.1 coexpression data)

CoexMap"106382089"


bnaLOC106382089 | Entrez gene ID : 106382089    
Species bna ath gma vvi ppo mtr sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta
Paralog 1 2 3 2 2 2 2 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03018 [list] [network] RNA degradation (380 genes)
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO:0005622 [list] [network] intracellular anatomical structure  (25455 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5995 genes)  IEA  
Protein XP_013677503.2 [sequence] [blastp]
XP_013677504.2 [sequence] [blastp]
XP_013677505.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  plas 4,  mito 1,  pero 1  (predict for XP_013677503.2)
chlo 4,  plas 4,  mito 1,  pero 1  (predict for XP_013677504.2)
chlo 4,  plas 4,  mito 1,  pero 1  (predict for XP_013677505.2)
Subcellular
localization
TargetP
chlo 3  (predict for XP_013677503.2)
chlo 3  (predict for XP_013677504.2)
chlo 3  (predict for XP_013677505.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106382089

.
ath-u.5
for
AT2G01130

.
ath-u.5
for
AT1G48650

.
gma-u.5
for
100808902

.
gma-u.5
for
100806141

.
gma-u.5
for
100798684

.
vvi-u.5
for
100244105

.
vvi-u.5
for
100264518

.
ppo-u.5
for
7453895

.
ppo-u.5
for
7459805

.
mtr-u.5
for
11410150

.
mtr-u.5
for
25485451

.
sly-u.5
for
101263393

.
sly-u.5
for
101261705

.
osa-u.5
for
4326075

.
zma-u.5
for
103649879

.


Ortholog ID: 4849
Species ath ath gma gma sly sly osa zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot sot cit cit bdi nta nta
Symbol AT2G01130 AT1G48650 LOC100808902 LOC100798684 LOC101263393 LOC101261705 LOC4326075 LOC103649879 LOC103827605 LOC103871455 LOC100264518 LOC100244105 LOC7453895 LOC7459805 LOC25485451 LOC11410150 LOC123059825 LOC123068291 LOC123442414 LOC107886710 LOC107904655 LOC106382089 LOC111216220 LOC8070438 LOC102604132 LOC102586003 LOC102628100 LOC102617632 LOC100830414 LOC107763499 LOC107759510
Function* DEA(D/H)-box RNA helicase family protein DEA(D/H)-box RNA helicase family protein DExH-box ATP-dependent RNA helicase DExH5, mitochondrial DExH-box ATP-dependent RNA helicase DExH5, mitochondrial DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial DExH-box ATP-dependent RNA helicase DExH5, mitochondrial DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH3-like DExH-box ATP-dependent RNA helicase DExH5, mitochondrial DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH3 ATP-dependent RNA helicase DHX36 ATP-dependent RNA helicase DHX36 DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial DExH-box ATP-dependent RNA helicase DExH3 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial DExH-box ATP-dependent RNA helicase DExH5, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03460 Fanconi anemia pathway 3
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03460 Fanconi anemia pathway 2
ppo03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 2
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04148 Efferocytosis 2
ghi03018 RNA degradation 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi00480 Glutathione metabolism 2
ghi00196 Photosynthesis - antenna proteins 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 3
bna03410 Base excision repair 3
bna03420 Nucleotide excision repair 3
bna03440 Homologous recombination 3
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 3
bna03410 Base excision repair 3
bna03420 Nucleotide excision repair 3
bna03440 Homologous recombination 3
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
sbi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03440 Homologous recombination 2
nta03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 814642 841287 100808902 100798684 101263393 101261705 4326075 103649879 103827605 103871455 100264518 100244105 7453895 7459805 25485451 11410150 123059825 123068291 123442414 107886710 107904655 106382089 111216220 8070438 102604132 102586003 102628100 102617632 100830414 107763499 107759510
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