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Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103851402   uncharacterized LOC103851402 
 bra-r.6   103845608   non-structural maintenance of chromosomes element 1 homolog 
 ath-u.5   emb1379   embryo defective 1379 
 ghi-r.1   121224211   non-structural maintenance of chromosomes element 1 homolog 
 ghi-r.1   121215567   non-structural maintenance of chromosomes element 1 homolog 
 cit-r.1   102625235   uncharacterized LOC102625235 
 gma-u.5   100803479   non-structural maintenance of chromosomes element 1 homolog 
 vvi-u.5   100259925   uncharacterized LOC100259925 
 ppo-u.5   18098054   uncharacterized LOC18098054 
 mtr-u.5   25489594   non-structural maintenance of chromosomes element 1 homolog 
 sly-u.5   101257695   uncharacterized LOC101257695 
 sot-r.1   102585398   non-structural maintenance of chromosomes element 1 homolog 
 nta-r.1   107830679   uncharacterized LOC107830679 
 nta-r.1   107825748   uncharacterized LOC107825748 
 osa-u.5   4349672   uncharacterized LOC4349672 
 osa-u.5   4351390   uncharacterized LOC4351390 
 zma-u.5   100274498   embryo defective 1379 
 tae-r.2   123120433   non-structural maintenance of chromosomes element 1 homolog 
 tae-r.2   123111301   non-structural maintenance of chromosomes element 1 homolog 
 tae-r.2   123103110   non-structural maintenance of chromosomes element 1 homolog 
 hvu-r.1   123452870   non-structural maintenance of chromosomes element 1 homolog 
 sbi-r.1   8071439   non-structural maintenance of chromosomes element 1 homolog 
 sbi-r.1   8083054   non-structural maintenance of chromosomes element 1 homolog 
 bdi-r.1   100845442   non-structural maintenance of chromosomes element 1 homolog 
 bdi-r.1   112270699   non-structural maintenance of chromosomes element 1 homolog 
 cre-r.1   CHLRE_03g181650v5   uncharacterized protein 

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Top 50 coexpressed genes to 103851402 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 103851402 (bra-r.6 coexpression data)

CoexMap"106384939"


bnaLOC106384939 | Entrez gene ID : 106384939    
Species bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre bna
Paralog 2 1 2 1 1 1 1 1 1 1 2 2 1 3 1 2 2 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006301 [list] [network] DNA damage tolerance  (52 genes)  IEA  
GO:0000724 [list] [network] double-strand break repair via homologous recombination  (307 genes)  IEA  
GO CC
GO:0030915 [list] [network] Smc5-Smc6 complex  (19 genes)  IEA  
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (1079 genes)  IEA  
Protein XP_013680321.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 4,  cyto 1,  mito 1  (predict for XP_013680321.2)
Subcellular
localization
TargetP
mito 4  (predict for XP_013680321.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103851402
bra-r.6
for
103845608
ath-u.5
for
emb1379
ghi-r.1
for
121224211
ghi-r.1
for
121215567
cit-r.1
for
102625235
gma-u.5
for
100803479
vvi-u.5
for
100259925
ppo-u.5
for
18098054
mtr-u.5
for
25489594
sly-u.5
for
101257695
sot-r.1
for
102585398
nta-r.1
for
107830679
nta-r.1
for
107825748
osa-u.5
for
4349672
osa-u.5
for
4351390
zma-u.5
for
100274498
tae-r.2
for
123120433
tae-r.2
for
123111301
tae-r.2
for
123103110
hvu-r.1
for
123452870
sbi-r.1
for
8071439
sbi-r.1
for
8083054
bdi-r.1
for
100845442
bdi-r.1
for
112270699
cre-r.1
for
CHLRE_03g181650v5


Ortholog ID: 7345
Species bra bra ath ghi ghi cit gma vvi ppo mtr sly sot nta nta osa osa zma tae tae tae hvu sbi sbi bdi bdi cre
Symbol LOC103851402 LOC103845608 emb1379 LOC121224211 LOC121215567 LOC102625235 LOC100803479 LOC100259925 LOC18098054 LOC25489594 LOC101257695 LOC102585398 LOC107830679 LOC107825748 LOC4349672 LOC4351390 LOC100274498 LOC123120433 LOC123111301 LOC123103110 LOC123452870 LOC8071439 LOC8083054 LOC100845442 LOC112270699 CHLRE_03g181650v5
Function* uncharacterized LOC103851402 non-structural maintenance of chromosomes element 1 homolog embryo defective 1379 non-structural maintenance of chromosomes element 1 homolog non-structural maintenance of chromosomes element 1 homolog uncharacterized LOC102625235 non-structural maintenance of chromosomes element 1 homolog uncharacterized LOC100259925 uncharacterized LOC18098054 non-structural maintenance of chromosomes element 1 homolog uncharacterized LOC101257695 non-structural maintenance of chromosomes element 1 homolog uncharacterized LOC107830679 uncharacterized LOC107825748 uncharacterized LOC4349672 uncharacterized LOC4351390 embryo defective 1379 non-structural maintenance of chromosomes element 1 homolog non-structural maintenance of chromosomes element 1 homolog non-structural maintenance of chromosomes element 1 homolog non-structural maintenance of chromosomes element 1 homolog non-structural maintenance of chromosomes element 1 homolog non-structural maintenance of chromosomes element 1 homolog non-structural maintenance of chromosomes element 1 homolog non-structural maintenance of chromosomes element 1 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 9
bra00240 Pyrimidine metabolism 2
bra01232 Nucleotide metabolism 2
bra03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 6
ath03410 Base excision repair 4
ath03430 Mismatch repair 3
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 7
ghi03420 Nucleotide excision repair 7
ghi03430 Mismatch repair 7
ghi03410 Base excision repair 4
ghi03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 6
ghi03420 Nucleotide excision repair 6
ghi03430 Mismatch repair 6
ghi03410 Base excision repair 4
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03430 Mismatch repair 7
vvi03030 DNA replication 6
vvi03420 Nucleotide excision repair 6
vvi03410 Base excision repair 4
vvi03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 4
ppo03440 Homologous recombination 2
ppo03410 Base excision repair 2
ppo03420 Nucleotide excision repair 2
ppo03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 10
sly03420 Nucleotide excision repair 2
sly03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 3
sot00230 Purine metabolism 2
sot00240 Pyrimidine metabolism 2
sot00480 Glutathione metabolism 2
sot01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 3
nta03420 Nucleotide excision repair 3
nta03082 ATP-dependent chromatin remodeling 2
nta03410 Base excision repair 2
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 4
nta03420 Nucleotide excision repair 4
nta03082 ATP-dependent chromatin remodeling 2
nta03410 Base excision repair 2
nta03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00240 Pyrimidine metabolism 3
osa01232 Nucleotide metabolism 3
osa00230 Purine metabolism 2
osa00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00240 Pyrimidine metabolism 3
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 3
zma03030 DNA replication 2
zma00520 Amino sugar and nucleotide sugar metabolism 2
zma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 3
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
tae03430 Mismatch repair 3
tae03440 Homologous recombination 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae03030 DNA replication 2
tae03410 Base excision repair 2
tae03420 Nucleotide excision repair 2
tae03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00514 Other types of O-glycan biosynthesis 3
tae03083 Polycomb repressive complex 3
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01200 Carbon metabolism 3
sbi01230 Biosynthesis of amino acids 3
sbi00010 Glycolysis / Gluconeogenesis 2
sbi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00230 Purine metabolism 2
bdi00240 Pyrimidine metabolism 2
bdi00480 Glutathione metabolism 2
bdi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00230 Purine metabolism 2
bdi00240 Pyrimidine metabolism 2
bdi00480 Glutathione metabolism 2
bdi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 2
cre03410 Base excision repair 2
cre03420 Nucleotide excision repair 2
cre03430 Mismatch repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103851402 103845608 832240 121224211 121215567 102625235 100803479 100259925 18098054 25489594 101257695 102585398 107830679 107825748 4349672 4351390 100274498 123120433 123111301 123103110 123452870 8071439 8083054 100845442 112270699 5728484
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