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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107914418   putative pentatricopeptide repeat-containing protein At5g08490 
 ghi-r.1   107896869   putative pentatricopeptide repeat-containing protein At5g08490 
 cit-r.1   102609235   putative pentatricopeptide repeat-containing protein At5g08490 
 gma-u.5   100783369   putative pentatricopeptide repeat-containing protein At5g08490 
 vvi-u.5   100240784   putative pentatricopeptide repeat-containing protein At5g08490 
 mtr-u.5   11425568   putative pentatricopeptide repeat-containing protein At5g08490 
 sly-u.5   101247759   putative pentatricopeptide repeat-containing protein At5g08490 
 sot-r.1   102601280   putative pentatricopeptide repeat-containing protein At5g08490 
 nta-r.1   107786146   putative pentatricopeptide repeat-containing protein At5g08490 
 nta-r.1   107793739   putative pentatricopeptide repeat-containing protein At5g08490 
 osa-u.5   4329053   putative pentatricopeptide repeat-containing protein At5g08490 
 zma-u.5   103641674   putative pentatricopeptide repeat-containing protein At5g08490 
 tae-r.2   123045545   putative pentatricopeptide repeat-containing protein At5g08490 
 hvu-r.1   123426794   putative pentatricopeptide repeat-containing protein At5g08490 
 bdi-r.1   100826728   putative pentatricopeptide repeat-containing protein At5g08490 

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Top 50 coexpressed genes to 107914418 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107914418 (ghi-r.1 coexpression data)

CoexMap"106384965"


bnaLOC106384965 | Entrez gene ID : 106384965    
Species ghi cit gma vvi mtr sly sot nta osa zma tae hvu bdi bna ppo cre sbi bra ath
Paralog 2 1 1 1 1 1 1 2 1 1 1 1 1 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (870 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_048607828.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  chlo 4,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for XP_048607828.1)
Subcellular
localization
TargetP
mito 3  (predict for XP_048607828.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107914418
ghi-r.1
for
107896869
cit-r.1
for
102609235
gma-u.5
for
100783369
vvi-u.5
for
100240784
mtr-u.5
for
11425568
sly-u.5
for
101247759
sot-r.1
for
102601280
nta-r.1
for
107786146
nta-r.1
for
107793739
osa-u.5
for
4329053
zma-u.5
for
103641674
tae-r.2
for
123045545
hvu-r.1
for
123426794
bdi-r.1
for
100826728


Ortholog ID: 11399
Species ghi ghi cit gma vvi mtr sly sot nta nta osa zma tae hvu bdi
Symbol LOC107914418 LOC107896869 LOC102609235 LOC100783369 LOC100240784 LOC11425568 LOC101247759 LOC102601280 LOC107786146 LOC107793739 LOC4329053 LOC103641674 LOC123045545 LOC123426794 LOC100826728
Function* putative pentatricopeptide repeat-containing protein At5g08490 putative pentatricopeptide repeat-containing protein At5g08490 putative pentatricopeptide repeat-containing protein At5g08490 putative pentatricopeptide repeat-containing protein At5g08490 putative pentatricopeptide repeat-containing protein At5g08490 putative pentatricopeptide repeat-containing protein At5g08490 putative pentatricopeptide repeat-containing protein At5g08490 putative pentatricopeptide repeat-containing protein At5g08490 putative pentatricopeptide repeat-containing protein At5g08490 putative pentatricopeptide repeat-containing protein At5g08490 putative pentatricopeptide repeat-containing protein At5g08490 putative pentatricopeptide repeat-containing protein At5g08490 putative pentatricopeptide repeat-containing protein At5g08490 putative pentatricopeptide repeat-containing protein At5g08490 putative pentatricopeptide repeat-containing protein At5g08490
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 2
sot00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107914418 107896869 102609235 100783369 100240784 11425568 101247759 102601280 107786146 107793739 4329053 103641674 123045545 123426794 100826728
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