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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106389580   transcription factor bHLH110 
 ath-u.5   AT1G27660   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 gma-u.5   100782565   transcription factor bHLH111 
 vvi-u.5   100260944   transcription factor bHLH110 
 ppo-u.5   7479726   transcription factor bHLH110 
 mtr-u.5   25490216   transcription factor bHLH110 
 sly-u.5   101267521   transcription factor bHLH110 
 zma-u.5   103649916   transcription factor bHLH110 

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Top 50 coexpressed genes to 106389580 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106389580 (bna-r.1 coexpression data)

CoexMap"106389580"


bnaLOC106389580 | Entrez gene ID : 106389580    
Species bna ath gma vvi ppo mtr sly zma sbi nta bra osa cre cit hvu bdi sot tae ghi
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (1371 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (792 genes)  IEA  
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (968 genes)  IEA  
GO:0046983 [list] [network] protein dimerization activity  (1531 genes)  IEA  
Protein XP_013685328.2 [sequence] [blastp]
XP_013685329.2 [sequence] [blastp]
XP_013685332.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_013685328.2)
nucl 9  (predict for XP_013685329.2)
nucl 9  (predict for XP_013685332.2)
Subcellular
localization
TargetP
chlo 7  (predict for XP_013685328.2)
chlo 7  (predict for XP_013685329.2)
chlo 5,  other 4  (predict for XP_013685332.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106389580

.
ath-u.5
for
AT1G27660

.
gma-u.5
for
100782565

.
vvi-u.5
for
100260944

.
ppo-u.5
for
7479726

.
mtr-u.5
for
25490216

.
sly-u.5
for
101267521

.
zma-u.5
for
103649916

.


Ortholog ID: 6145
Species ath gma sly zma bra vvi ppo mtr ghi ghi bna bna sot cit bdi nta nta
Symbol AT1G27660 LOC100782565 LOC101267521 LOC103649916 LOC103835382 LOC100260944 LOC7454376 LOC25490216 LOC107943430 LOC107936552 LOC106389580 LOC106367912 LOC102601100 LOC102623049 LOC100823554 LOC107783563 LOC107790733
Function* basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor bHLH111 transcription factor bHLH110 transcription factor bHLH110 transcription factor bHLH110 transcription factor bHLH110 transcription factor bHLH110 transcription factor bHLH110 transcription factor bHLH110 transcription factor bHLH110 transcription factor bHLH110 transcription factor bHLH110-like transcription factor bHLH110 transcription factor bHLH110 transcription factor bHLH110 transcription factor bHLH110 transcription factor bHLH110
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00564 Glycerophospholipid metabolism 2
zma00240 Pyrimidine metabolism 2
zma01232 Nucleotide metabolism 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 2
ghi03410 Base excision repair 2
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00760 Nicotinate and nicotinamide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839658 100782565 101267521 103649916 103835382 100260944 7454376 25490216 107943430 107936552 106389580 106367912 102601100 102623049 100823554 107783563 107790733
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