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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106389983   putative E3 ubiquitin-protein ligase RF298 
 ath-u.5   AT4G03000   RING/U-box superfamily protein 
 ath-u.5   AT1G03365   RING/U-box superfamily protein 
 gma-u.5   100777140   putative E3 ubiquitin-protein ligase RF298 
 gma-u.5   100775512   putative E3 ubiquitin-protein ligase RF298 
 gma-u.5   100818439   putative E3 ubiquitin-protein ligase RF298 
 vvi-u.5   100249384   putative E3 ubiquitin-protein ligase RF298 
 ppo-u.5   7475938   putative E3 ubiquitin-protein ligase RF298 
 ppo-u.5   7469098   putative E3 ubiquitin-protein ligase RF298 
 mtr-u.5   11445891   putative E3 ubiquitin-protein ligase RF298 
 mtr-u.5   11427665   putative E3 ubiquitin-protein ligase RF4 
 osa-u.5   4337764   putative E3 ubiquitin-protein ligase RF298 
 zma-u.5   103647645   putative E3 ubiquitin-protein ligase RF298 
 zma-u.5   103633130   putative E3 ubiquitin-protein ligase RF298 

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Top 50 coexpressed genes to 106389983 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106389983 (bna-r.1 coexpression data)

CoexMap"106389983"


bnaLOC106389983 | Entrez gene ID : 106389983    
Species bna ath gma vvi ppo mtr osa zma bdi hvu bra cit sbi sly ghi sot nta cre tae
Paralog 1 2 3 1 2 2 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_013685797.2 [sequence] [blastp]
XP_013685798.2 [sequence] [blastp]
XP_048595198.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 2,  cyto 1  (predict for XP_013685797.2)
chlo 6,  nucl 2,  cyto 1  (predict for XP_013685798.2)
chlo 6,  nucl 3,  chlo_mito 3  (predict for XP_048595198.1)
Subcellular
localization
TargetP
chlo 6,  other 4  (predict for XP_013685797.2)
chlo 6,  other 4  (predict for XP_013685798.2)
chlo 6,  other 4  (predict for XP_048595198.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106389983
ath-u.5
for
AT4G03000
ath-u.5
for
AT1G03365
gma-u.5
for
100777140
gma-u.5
for
100775512
gma-u.5
for
100818439
vvi-u.5
for
100249384
ppo-u.5
for
7475938
ppo-u.5
for
7469098
mtr-u.5
for
11445891
mtr-u.5
for
11427665
osa-u.5
for
4337764
zma-u.5
for
103647645
zma-u.5
for
103633130


Ortholog ID: 3250
Species bna bna bra bra ath ath ghi cit cit gma gma vvi ppo ppo mtr mtr sly sly sot sot nta nta osa zma zma tae tae hvu sbi bdi
Symbol LOC106423082 LOC106401422 LOC103836700 LOC103844512 AT1G03365 AT4G03000 LOC107929111 LOC102610693 LOC102627994 LOC100785921 LOC100818439 LOC100249384 LOC7469098 LOC7475938 LOC11427665 LOC11445891 LOC101268285 LOC101267057 LOC102579237 LOC102594650 LOC107786506 LOC107819544 LOC4337764 LOC103647645 LOC103633130 LOC123180377 LOC123111053 LOC123424372 LOC8077241 LOC100835844
Function* putative E3 ubiquitin-protein ligase RF4 putative E3 ubiquitin-protein ligase RF4 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF4 RING/U-box superfamily protein RING/U-box superfamily protein putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF4 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF298 putative E3 ubiquitin-protein ligase RF4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00073 Cutin, suberine and wax biosynthesis 2
ghi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit00020 Citrate cycle (TCA cycle) 2
cit00785 Lipoic acid metabolism 2
cit01200 Carbon metabolism 2
cit01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
gma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03250 Viral life cycle - HIV-1 2
mtr03272 Virion - Hepatitis viruses 2
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03083 Polycomb repressive complex 2
sly03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106423082 106401422 103836700 103844512 10723112 828112 107929111 102610693 102627994 100785921 100818439 100249384 7469098 7475938 11427665 11445891 101268285 101267057 102579237 102594650 107786506 107819544 4337764 103647645 103633130 123180377 123111053 123424372 8077241 100835844
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