ATTED-II : GeneCoexpression result

Species	Gene	Description
bna-r.1	106390831	DNA-binding protein SMUBP-2-like
ath-u.5	AT5G35970	P-loop containing nucleoside triphosphate hydrolases superfamily protein
gma-u.5	100816409	DNA-binding protein SMUBP-2
gma-u.5	100799347	DNA-binding protein SMUBP-2
vvi-u.5	100261474	uncharacterized LOC100261474
ppo-u.5	7482421	uncharacterized LOC7482421
mtr-u.5	25482868	DNA-binding protein SMUBP-2
sly-u.5	101246606	DNA polymerase alpha-associated DNA helicase A
osa-u.5	4330452	DNA polymerase alpha-associated DNA helicase A
osa-u.5	4346450	DNA polymerase alpha-associated DNA helicase A
zma-u.5	103632538	DNA-binding protein SMUBP-2

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0043139 [list] [network] 5'-3' DNA helicase activity

(7 genes)

IEA

Protein

XP_048610696.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, mito 1, cyto_mito 1

(predict for XP_048610696.1)

Subcellular
localization
TargetP

chlo 8

(predict for XP_048610696.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106390831	ath-u.5 for AT5G35970	gma-u.5 for 100816409	gma-u.5 for 100799347	vvi-u.5 for 100261474	ppo-u.5 for 7482421	mtr-u.5 for 25482868	sly-u.5 for 101246606	osa-u.5 for 4330452	osa-u.5 for 4346450	zma-u.5 for 103632538

Ortholog ID: 7358

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

DNA-binding protein SMUBP-2-like

DNA-binding protein SMUBP-2

P-loop containing nucleoside triphosphate hydrolases superfamily protein

DNA-binding protein SMUBP-2

uncharacterized LOC102630173

DNA-binding protein SMUBP-2

uncharacterized LOC100261474

uncharacterized LOC7482421

DNA-binding protein SMUBP-2

DNA polymerase alpha-associated DNA helicase A

DNA-binding protein SMUBP-2

DNA polymerase alpha-associated DNA helicase A

DNA polymerase alpha-associated DNA helicase A-like

DNA polymerase alpha-associated DNA helicase A

DNA-binding protein SMUBP-2

DNA-binding protein SMUBP-2-like

DNA-binding protein SMUBP-2

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00906	Carotenoid biosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00906	Carotenoid biosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00073	Cutin, suberine and wax biosynthesis	2
ghi00561	Glycerolipid metabolism	2
ghi00630	Glyoxylate and dicarboxylate metabolism	2
ghi01200	Carbon metabolism	2
ghi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00073	Cutin, suberine and wax biosynthesis	2
ghi00561	Glycerolipid metabolism	2
ghi00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
ghi01240	Biosynthesis of cofactors	2
ghi04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00860	Porphyrin metabolism	6
gma00195	Photosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00860	Porphyrin metabolism	4
gma00195	Photosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00860	Porphyrin metabolism	5
sly04712	Circadian rhythm - plant	2
sly00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01200	Carbon metabolism	2
sot04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
nta00270	Cysteine and methionine metabolism	2
nta00350	Tyrosine metabolism	2
nta00360	Phenylalanine metabolism	2
nta00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
nta00270	Cysteine and methionine metabolism	2
nta00350	Tyrosine metabolism	2
nta00360	Phenylalanine metabolism	2
nta00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04712	Circadian rhythm - plant	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00900	Terpenoid backbone biosynthesis	2
tae00053	Ascorbate and aldarate metabolism	2
tae01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00051	Fructose and mannose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00380	Tryptophan metabolism	3
bdi00230	Purine metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

106390831

106408885

103849186

833589

107913562

107891390

102630173

100816409

100799347

100261474

7482421

25482868

101246606

102594548

107804694

107795928

4346450

4330452

103632538

123128120

123111508

123401617

123395300

8064666

8073162

100838511

100845695

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 106390831 (bna-r.1 coexpression data)

Top 50 enrichment test to 106390831 (bna-r.1 coexpression data)


Species	bna	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	sbi	ghi	sot	nta	cre	tae
Paralog	1	1	2	1	1	1	1	2	1	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106390831 (bna-r.1 coexpression data)

Top 50 enrichment test to 106390831 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**