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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106391119   DNA polymerase eta 
 ath-u.5   POLH   Y-family DNA polymerase H 
 gma-u.5   100780894   DNA polymerase eta 
 vvi-u.5   100266192   DNA polymerase eta 
 ppo-u.5   7465359   DNA polymerase eta 
 mtr-u.5   25493444   DNA polymerase eta 
 sly-u.5   101257297   DNA polymerase eta 
 osa-u.5   4325305   DNA polymerase eta 
 zma-u.5   103651191   DNA polymerase eta 

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Top 50 coexpressed genes to 106391119 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106391119 (bna-r.1 coexpression data)

CoexMap"106391119"


bnaLOC106391119 | Entrez gene ID : 106391119    
Species bna ath gma vvi ppo mtr sly osa zma hvu cit bra ghi sbi bdi nta tae cre sot
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03460 [list] [network] Fanconi anemia pathway (105 genes)
GO BP
GO:0042276 [list] [network] error-prone translesion synthesis  (13 genes)  IEA  
GO:0009314 [list] [network] response to radiation  (396 genes)  IEA  
GO CC
GO:0035861 [list] [network] site of double-strand break  (26 genes)  IEA  
GO:0005657 [list] [network] replication fork  (213 genes)  IEA  
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0003887 [list] [network] DNA-directed DNA polymerase activity  (51 genes)  IEA  
GO:0003684 [list] [network] damaged DNA binding  (195 genes)  IEA  
Protein XP_013687142.1 [sequence] [blastp]
XP_013687150.1 [sequence] [blastp]
XP_013687158.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 3  (predict for XP_013687142.1)
nucl 7,  cyto 3  (predict for XP_013687150.1)
nucl 9  (predict for XP_013687158.1)
Subcellular
localization
TargetP
other 8  (predict for XP_013687142.1)
other 8  (predict for XP_013687150.1)
other 6  (predict for XP_013687158.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106391119
ath-u.5
for
POLH
gma-u.5
for
100780894
vvi-u.5
for
100266192
ppo-u.5
for
7465359
mtr-u.5
for
25493444
sly-u.5
for
101257297
osa-u.5
for
4325305
zma-u.5
for
103651191


Ortholog ID: 6671
Species bna bna bra ath ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi cre
Symbol LOC106391119 LOC106386352 LOC103827832 POLH LOC107915273 LOC107960652 LOC102631204 LOC100780894 LOC100266192 LOC7465359 LOC25493444 LOC101257297 LOC102599189 LOC107795010 LOC107829874 LOC4325305 LOC103655706 LOC123079219 LOC123062100 LOC123444447 LOC8075604 LOC100821109 CHLRE_12g524150v5
Function* DNA polymerase eta DNA polymerase eta-like DNA polymerase eta Y-family DNA polymerase H DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta-like DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta DNA polymerase eta uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 4
bna03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03460 Fanconi anemia pathway 3
ath03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 4
ghi01240 Biosynthesis of cofactors 4
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 2
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi01240 Biosynthesis of cofactors 2
ghi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 4
gma03410 Base excision repair 3
gma03420 Nucleotide excision repair 3
gma03430 Mismatch repair 3
gma00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
mtr04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03013 Nucleocytoplasmic transport 2
nta03250 Viral life cycle - HIV-1 2
nta03030 DNA replication 2
nta03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 4
tae03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03460 Fanconi anemia pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106391119 106386352 103827832 834503 107915273 107960652 102631204 100780894 100266192 7465359 25493444 101257297 102599189 107795010 107829874 4325305 103655706 123079219 123062100 123444447 8075604 100821109 5722524
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