Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106391812   4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic 
 bna-r.1   106388057   4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic 
 bna-r.1   106438204   4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic 
 bna-r.1   111215184   4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic-like 
 bra-r.6   103866117   4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic 
 bra-r.6   103858112   4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic 
 ath-u.5   AT2G44040   Dihydrodipicolinate reductase, bacterial/plant 
 ath-u.5   AT3G59890   Dihydrodipicolinate reductase, bacterial/plant 
 ghi-r.1   107955285   4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic 
 ghi-r.1   107954798   4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic 
 ghi-r.1   107962686   4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic 
 cit-r.1   102608984   4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic 
 gma-u.5   100807997   dihydrodipicolinate reductase 2, chloroplastic-like 
 gma-u.5   100819889   4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic 
 vvi-u.5   100268085   4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic 
 ppo-u.5   18106400   4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic 
 mtr-u.5   25500770   4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic 
 sly-u.5   101253321   4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic-like 
 nta-r.1   107766908   4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic-like 
 nta-r.1   107813436   4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic 
 osa-u.5   4329224   probable 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic 
 osa-u.5   4332231   probable 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic 
 zma-u.5   100194039   4-hydroxy-tetrahydrodipicolinate reductase 2 chloroplastic 
 zma-u.5   100272879   4-hydroxy-tetrahydrodipicolinate reductase 2 chloroplastic 
 tae-r.2   123038620   probable 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic 
 tae-r.2   123085178   probable 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic 
 tae-r.2   123092781   probable 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic 
 hvu-r.1   123425096   probable 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic 
 hvu-r.1   123449167   probable 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic 
 sbi-r.1   110437410   probable 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic 
 sbi-r.1   8054352   probable 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic 
 bdi-r.1   100834116   probable 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic 
 bdi-r.1   100821746   probable 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic 
 cre-r.1   CHLRE_14g627850v5   uncharacterized protein 

close


Top 50 coexpressed genes to 106391812 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 106391812 (bna-r.1 coexpression data)

CoexMap"106391812"


bnaLOC106391812 | Entrez gene ID : 106391812    
Species bna bra ath ghi cit gma vvi ppo mtr sly nta osa zma tae hvu sbi bdi cre sot
Paralog 4 2 2 3 1 2 1 1 1 1 2 2 2 3 2 2 2 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00261 [list] [network] Monobactam biosynthesis (38 genes)
bna00300 [list] [network] Lysine biosynthesis (41 genes)
bna01230 [list] [network] Biosynthesis of amino acids (773 genes)
GO BP
GO:0019877 [list] [network] diaminopimelate biosynthetic process  (4 genes)  IEA  
GO:0009089 [list] [network] lysine biosynthetic process via diaminopimelate  (29 genes)  IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (365 genes)  IEA  
GO MF
GO:0008839 [list] [network] 4-hydroxy-tetrahydrodipicolinate reductase  (6 genes)  IEA  
GO:0070402 [list] [network] NADPH binding  (9 genes)  IEA  
Protein XP_013687980.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_013687980.2)
Subcellular
localization
TargetP
chlo 8  (predict for XP_013687980.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106391812
bna-r.1
for
106388057
bna-r.1
for
106438204
bna-r.1
for
111215184
bra-r.6
for
103866117
bra-r.6
for
103858112
ath-u.5
for
AT2G44040
ath-u.5
for
AT3G59890
ghi-r.1
for
107955285
ghi-r.1
for
107954798
ghi-r.1
for
107962686
cit-r.1
for
102608984
gma-u.5
for
100807997
gma-u.5
for
100819889
vvi-u.5
for
100268085
ppo-u.5
for
18106400
mtr-u.5
for
25500770
sly-u.5
for
101253321
nta-r.1
for
107766908
nta-r.1
for
107813436
osa-u.5
for
4329224
osa-u.5
for
4332231
zma-u.5
for
100194039
zma-u.5
for
100272879
tae-r.2
for
123038620
tae-r.2
for
123085178
tae-r.2
for
123092781
hvu-r.1
for
123425096
hvu-r.1
for
123449167
sbi-r.1
for
110437410
sbi-r.1
for
8054352
bdi-r.1
for
100834116
bdi-r.1
for
100821746
cre-r.1
for
CHLRE_14g627850v5


Ortholog ID: 4887
Species bna bna bna bra bra ath ath ghi ghi ghi cit gma gma vvi ppo mtr sly nta nta osa osa zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC106391812 LOC106438204 LOC111215184 LOC103866117 LOC103858112 AT2G44040 AT3G59890 LOC107955285 LOC107954798 LOC107962686 LOC102608984 LOC100807997 LOC100819889 LOC100268085 LOC18106400 LOC25500770 LOC101253321 LOC107766908 LOC107813436 LOC4329224 LOC4332231 LOC100194039 LOC100272879 LOC123085178 LOC123092781 LOC123112068 LOC123425096 LOC123449167 LOC110437410 LOC8054352 LOC100834116 LOC100821746 CHLRE_14g627850v5
Function* 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic-like 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic Dihydrodipicolinate reductase, bacterial/plant Dihydrodipicolinate reductase, bacterial/plant 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic dihydrodipicolinate reductase 2, chloroplastic-like 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic-like 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic-like 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic probable 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic probable 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic 4-hydroxy-tetrahydrodipicolinate reductase 2 chloroplastic 4-hydroxy-tetrahydrodipicolinate reductase 2 chloroplastic probable 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic probable 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic probable 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic probable 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic probable 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic probable 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic probable 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic probable 4-hydroxy-tetrahydrodipicolinate reductase 1, chloroplastic probable 4-hydroxy-tetrahydrodipicolinate reductase 2, chloroplastic uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00261 Monobactam biosynthesis 4
bna00300 Lysine biosynthesis 4
bna01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00261 Monobactam biosynthesis 4
bna00300 Lysine biosynthesis 4
bna01230 Biosynthesis of amino acids 4
bna03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00261 Monobactam biosynthesis 4
bna00300 Lysine biosynthesis 4
bna01230 Biosynthesis of amino acids 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 4
bra00970 Aminoacyl-tRNA biosynthesis 4
bra00261 Monobactam biosynthesis 2
bra00300 Lysine biosynthesis 2
bra03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 7
bra00250 Alanine, aspartate and glutamate metabolism 5
bra00230 Purine metabolism 4
bra01240 Biosynthesis of cofactors 4
bra01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 7
ath00300 Lysine biosynthesis 4
ath01232 Nucleotide metabolism 3
ath00220 Arginine biosynthesis 2
ath01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 3
ath00300 Lysine biosynthesis 3
ath01230 Biosynthesis of amino acids 3
ath00261 Monobactam biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 7
ghi00261 Monobactam biosynthesis 5
ghi00300 Lysine biosynthesis 5
ghi03010 Ribosome 2
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01230 Biosynthesis of amino acids 7
ghi00261 Monobactam biosynthesis 5
ghi00300 Lysine biosynthesis 5
ghi00970 Aminoacyl-tRNA biosynthesis 2
ghi00290 Valine, leucine and isoleucine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00261 Monobactam biosynthesis 5
ghi00300 Lysine biosynthesis 5
ghi01230 Biosynthesis of amino acids 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
cit00300 Lysine biosynthesis 2
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 10
gma00300 Lysine biosynthesis 6
gma01200 Carbon metabolism 4
gma00061 Fatty acid biosynthesis 4
gma01212 Fatty acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01230 Biosynthesis of amino acids 5
gma00261 Monobactam biosynthesis 3
gma00300 Lysine biosynthesis 3
gma04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
vvi01240 Biosynthesis of cofactors 3
vvi00061 Fatty acid biosynthesis 2
vvi00780 Biotin metabolism 2
vvi01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 9
ppo03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03018 RNA degradation 4
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01232 Nucleotide metabolism 4
nta00230 Purine metabolism 3
nta00250 Alanine, aspartate and glutamate metabolism 3
nta01240 Biosynthesis of cofactors 3
nta00261 Monobactam biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01232 Nucleotide metabolism 4
nta00230 Purine metabolism 3
nta00250 Alanine, aspartate and glutamate metabolism 3
nta01240 Biosynthesis of cofactors 3
nta00261 Monobactam biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 9
osa01230 Biosynthesis of amino acids 5
osa00970 Aminoacyl-tRNA biosynthesis 4
osa00300 Lysine biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 11
zma01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00970 Aminoacyl-tRNA biosynthesis 4
zma01240 Biosynthesis of cofactors 4
zma00860 Porphyrin metabolism 2
zma00061 Fatty acid biosynthesis 2
zma00780 Biotin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00970 Aminoacyl-tRNA biosynthesis 3
tae00860 Porphyrin metabolism 3
tae01240 Biosynthesis of cofactors 3
tae00261 Monobactam biosynthesis 2
tae00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 18
tae00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00300 Lysine biosynthesis 4
tae01230 Biosynthesis of amino acids 4
tae00261 Monobactam biosynthesis 3
tae00010 Glycolysis / Gluconeogenesis 3
tae00020 Citrate cycle (TCA cycle) 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 3
hvu04141 Protein processing in endoplasmic reticulum 2
hvu03015 mRNA surveillance pathway 2
hvu00300 Lysine biosynthesis 2
hvu00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 6
hvu01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi01230 Biosynthesis of amino acids 3
sbi00230 Purine metabolism 2
sbi00061 Fatty acid biosynthesis 2
sbi01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi01230 Biosynthesis of amino acids 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 6
bdi00220 Arginine biosynthesis 3
bdi00250 Alanine, aspartate and glutamate metabolism 3
bdi00300 Lysine biosynthesis 3
bdi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 3
bdi01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00970 Aminoacyl-tRNA biosynthesis 3
cre03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106391812 106438204 111215184 103866117 103858112 819009 825159 107955285 107954798 107962686 102608984 100807997 100819889 100268085 18106400 25500770 101253321 107766908 107813436 4329224 4332231 100194039 100272879 123085178 123092781 123112068 123425096 123449167 110437410 8054352 100834116 100821746 66056303
The preparation time of this page was 0.2 [sec].