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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106394230   uncharacterized LOC106394230 
 ath-u.5   AT2G42510   survival motor neuron interacting protein 
 ath-u.5   AT1G54380   spliceosome protein-like protein 
 gma-u.5   100809164   gem-associated protein 2 
 gma-u.5   100790542   gem-associated protein 2 
 vvi-u.5   100260062   uncharacterized LOC100260062 
 ppo-u.5   18106971   uncharacterized LOC18106971 
 ppo-u.5   7486030   uncharacterized LOC7486030 
 mtr-u.5   11446023   gem-associated protein 2 
 sly-u.5   101253626   uncharacterized LOC101253626 
 osa-u.5   4350305   uncharacterized LOC4350305 
 zma-u.5   100285014   uncharacterized LOC100285014 

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Top 50 coexpressed genes to 106394230 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106394230 (bna-r.1 coexpression data)

CoexMap"106394230"


bnaLOC106394230 | Entrez gene ID : 106394230    
Species bna ath gma vvi ppo mtr sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta
Paralog 1 2 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0000387 [list] [network] spliceosomal snRNP assembly  (90 genes)  IEA  
GO CC
GO:0032797 [list] [network] SMN complex  (14 genes)  IEA  
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
Protein XP_048609296.1 [sequence] [blastp]
XP_048609297.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  plas 1,  pero 1,  cyto_nucl 1,  cysk_nucl 1  (predict for XP_048609296.1)
chlo 7,  nucl 1,  plas 1,  pero 1,  cyto_nucl 1,  cysk_nucl 1  (predict for XP_048609297.1)
Subcellular
localization
TargetP
scret 6  (predict for XP_048609296.1)
scret 6  (predict for XP_048609297.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106394230

.
ath-u.5
for
AT2G42510

.
ath-u.5
for
AT1G54380

.
gma-u.5
for
100809164

.
gma-u.5
for
100790542

.
vvi-u.5
for
100260062

.
ppo-u.5
for
18106971

.
ppo-u.5
for
7486030

.
mtr-u.5
for
11446023

.
sly-u.5
for
101253626

.
osa-u.5
for
4350305

.
zma-u.5
for
100285014

.


Ortholog ID: 7966
Species ath ath gma gma sly osa zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna cre sbi sot cit bdi nta nta
Symbol AT1G54380 AT2G42510 LOC100790542 LOC100809164 LOC101253626 LOC4350305 LOC100285014 LOC103866646 LOC100260062 LOC7486030 LOC18106971 LOC11446023 LOC123128900 LOC123146057 LOC123403678 LOC107903773 LOC107914698 LOC106392403 LOC106394230 CHLRE_09g405650v5 LOC8066197 LOC102594970 LOC102619708 LOC100838808 LOC107788051 LOC107780729
Function* spliceosome protein-like protein survival motor neuron interacting protein gem-associated protein 2 gem-associated protein 2 uncharacterized LOC101253626 uncharacterized LOC4350305 uncharacterized LOC100285014 uncharacterized LOC103866646 uncharacterized LOC100260062 uncharacterized LOC7486030 uncharacterized LOC18106971 gem-associated protein 2 uncharacterized LOC123128900 gem-associated protein 2 gem-associated protein 2-like uncharacterized LOC107903773 uncharacterized LOC107914698 uncharacterized LOC106392403 uncharacterized LOC106394230 uncharacterized protein uncharacterized LOC8066197 uncharacterized LOC102594970 uncharacterized LOC102619708 gem-associated protein 2 uncharacterized LOC107788051 uncharacterized LOC107780729
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03022 Basal transcription factors 3
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03420 Nucleotide excision repair 2
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03440 Homologous recombination 3
osa03030 DNA replication 2
osa03420 Nucleotide excision repair 2
osa03430 Mismatch repair 2
osa03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 7
bra03013 Nucleocytoplasmic transport 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
mtr03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
ghi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 2
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03018 RNA degradation 3
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 4
nta04120 Ubiquitin mediated proteolysis 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 7
nta03440 Homologous recombination 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841879 818851 100790542 100809164 101253626 4350305 100285014 103866646 100260062 7486030 18106971 11446023 123128900 123146057 123403678 107903773 107914698 106392403 106394230 66054842 8066197 102594970 102619708 100838808 107788051 107780729
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