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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106397415   double-stranded RNA-binding protein 1 
 ath-u.5   HYL1   dsRNA-binding domain-like superfamily protein 
 gma-u.5   100806833   double-stranded RNA-binding protein 1 
 gma-u.5   100782651   double-stranded RNA-binding protein 1 
 vvi-u.5   100243781   double-stranded RNA-binding protein 1-like 
 ppo-u.5   7468848   double-stranded RNA-binding protein 1 
 ppo-u.5   7467230   double-stranded RNA-binding protein 1 
 mtr-u.5   11432283   double-stranded RNA-binding protein 1 
 sly-u.5   101257657   double-stranded RNA-binding protein 6 
 osa-u.5   4349575   double-stranded RNA-binding protein 7-like 
 zma-u.5   100284085   uncharacterized LOC100284085 

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Top 50 coexpressed genes to 106397415 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106397415 (bna-r.1 coexpression data)

CoexMap"106397415"


bnaLOC106397415 | Entrez gene ID : 106397415    
Species bna ath gma vvi ppo mtr sly osa zma sot hvu tae cit sbi ghi cre nta bdi bra
Paralog 1 1 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006364 [list] [network] rRNA processing  (647 genes)  IEA  
GO:0010468 [list] [network] regulation of gene expression  (6396 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0004525 [list] [network] ribonuclease III activity  (28 genes)  IEA  
GO:0003725 [list] [network] double-stranded RNA binding  (31 genes)  IEA  
Protein XP_013693449.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto_nucl 4,  chlo 3,  cyto 2  (predict for XP_013693449.1)
Subcellular
localization
TargetP
other 6  (predict for XP_013693449.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106397415

.
ath-u.5
for
HYL1

.
gma-u.5
for
100806833

.
gma-u.5
for
100782651

.
vvi-u.5
for
100243781

.
ppo-u.5
for
7468848

.
ppo-u.5
for
7467230

.
mtr-u.5
for
11432283

.
sly-u.5
for
101257657

.
osa-u.5
for
4349575

.
zma-u.5
for
100284085

.


Ortholog ID: 6396
Species ath gma gma sly osa zma bra bra vvi ppo ppo mtr hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol HYL1 LOC100782651 LOC100806833 LOC101257657 LOC4349575 LOC100284085 LOC103871744 LOC103836317 LOC100243781 LOC7468848 LOC7467230 LOC11432283 LOC123399981 LOC107942931 LOC107957827 LOC106362373 LOC106351177 LOC8055517 LOC102603097 LOC102616183 LOC100844921 LOC107794992 LOC107803960
Function* dsRNA-binding domain-like superfamily protein double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 6 double-stranded RNA-binding protein 7-like uncharacterized LOC100284085 double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 1-like double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 8-like double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 1-like double-stranded RNA-binding protein 8 double-stranded RNA-binding protein 1-like double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 8 double-stranded RNA-binding protein 1 double-stranded RNA-binding protein 1-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03082 ATP-dependent chromatin remodeling 2
zma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03440 Homologous recombination 2
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 3
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
ghi04626 Plant-pathogen interaction 6
ghi04144 Endocytosis 2
ghi04016 MAPK signaling pathway - plant 2
ghi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
sot03010 Ribosome 3
sot04141 Protein processing in endoplasmic reticulum 2
sot03013 Nucleocytoplasmic transport 2
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837498 100782651 100806833 101257657 4349575 100284085 103871744 103836317 100243781 7468848 7467230 11432283 123399981 107942931 107957827 106362373 106351177 8055517 102603097 102616183 100844921 107794992 107803960
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