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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT4G28820   HIT-type Zinc finger family protein 
 gma-u.5   100801915   zinc finger HIT domain-containing protein 3 
 gma-u.5   100527614   zinc finger HIT domain-containing protein 
 ppo-u.5   7459524   uncharacterized LOC7459524 
 mtr-u.5   25484154   zinc finger HIT domain-containing protein 3 
 sly-u.5   ZNHIT   zinc finger HIT-type containing protein 
 osa-u.5   4327428   uncharacterized LOC4327428 
 zma-u.5   100500952   HIT-type Zinc finger family protein 

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Top 50 coexpressed genes to AT4G28820 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G28820 (ath-u.5 coexpression data)

CoexMap"106399682"


bnaLOC106399682 | Entrez gene ID : 106399682    
Species ath gma ppo mtr sly osa zma sbi nta bra cre vvi cit hvu bdi sot tae bna ghi
Paralog 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0048254 [list] [network] snoRNA localization  (8 genes)  IEA  
GO:0000492 [list] [network] box C/D snoRNP assembly  (24 genes)  IEA  
GO:0000463 [list] [network] maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (66 genes)  IEA  
GO CC
GO:0070761 [list] [network] pre-snoRNP complex  (8 genes)  IEA  
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
Protein XP_013695622.2 [sequence] [blastp]
XP_013695685.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 2,  cyto 1,  mito 1,  plas 1,  mito_plas 1,  cyto_plas 1  (predict for XP_013695622.2)
chlo 5,  nucl 2,  plas 1,  cyto_nucl 1  (predict for XP_013695685.2)
Subcellular
localization
TargetP
other 5  (predict for XP_013695622.2)
other 5  (predict for XP_013695685.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
AT4G28820

.
gma-u.5
for
100801915

.
gma-u.5
for
100527614

.
ppo-u.5
for
7459524

.
mtr-u.5
for
25484154

.
sly-u.5
for
ZNHIT

.
osa-u.5
for
4327428

.
zma-u.5
for
100500952

.


Ortholog ID: 8106
Species ath gma gma sly osa zma bra ppo mtr tae tae hvu ghi ghi cre sbi sot cit bdi nta nta
Symbol AT4G28820 LOC100801915 LOC100527614 ZNHIT LOC4327428 LOC100500952 LOC103854107 LOC7459524 LOC25484154 LOC123071290 LOC123079635 LOC123444987 LOC107932438 LOC121219938 CHLRE_13g602600v5 LOC8085422 LOC102582946 LOC102622371 LOC100824889 LOC107817311 LOC142171507
Function* HIT-type Zinc finger family protein zinc finger HIT domain-containing protein 3 zinc finger HIT domain-containing protein zinc finger HIT-type containing protein uncharacterized LOC4327428 HIT-type Zinc finger family protein zinc finger HIT domain-containing protein 3 uncharacterized LOC7459524 zinc finger HIT domain-containing protein 3 zinc finger HIT domain-containing protein 3 zinc finger HIT domain-containing protein 3 zinc finger HIT domain-containing protein 3 uncharacterized LOC107932438 zinc finger HIT domain-containing protein 3 uncharacterized protein zinc finger HIT domain-containing protein 3 zinc finger HIT domain-containing protein 3 uncharacterized LOC102622371 zinc finger HIT domain-containing protein 3 uncharacterized LOC107817311 uncharacterized LOC142171507
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 3
ath03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03010 Ribosome 3
gma01232 Nucleotide metabolism 2
gma03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00061 Fatty acid biosynthesis 2
osa00062 Fatty acid elongation 2
osa01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00260 Glycine, serine and threonine metabolism 2
bra00261 Monobactam biosynthesis 2
bra00270 Cysteine and methionine metabolism 2
bra00300 Lysine biosynthesis 2
bra01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 5
ppo03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 3
tae00230 Purine metabolism 3
tae00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03440 Homologous recombination 3
tae04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829003 100801915 100527614 101259844 4327428 100500952 103854107 7459524 25484154 123071290 123079635 123444987 107932438 121219938 66056097 8085422 102582946 102622371 100824889 107817311 142171507
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