ATTED-II : GeneCoexpression result

Species	Gene	Description
bna-r.1	106400398	uncharacterized LOC106400398
bna-r.1	106389520	telomere length regulation protein elg1-like
bra-r.6	103832200	uncharacterized LOC103832200
ath-u.5	AT1G77620	P-loop containing nucleoside triphosphate hydrolases superfamily protein
ghi-r.1	107962509	uncharacterized LOC107962509
ghi-r.1	107901411	uncharacterized LOC107901411
cit-r.1	102625992	uncharacterized LOC102625992
gma-u.5	100815984	uncharacterized LOC100815984
gma-u.5	100784968	uncharacterized LOC100784968
gma-u.5	100784209	uncharacterized LOC100784209
vvi-u.5	104882466	uncharacterized LOC104882466
ppo-u.5	7469150	uncharacterized LOC7469150
ppo-u.5	7463160	uncharacterized LOC7463160
mtr-u.5	11426583	uncharacterized LOC11426583
mtr-u.5	11417234	uncharacterized LOC11417234
sly-u.5	101250607	uncharacterized LOC101250607
sot-r.1	102600450	uncharacterized LOC102600450
nta-r.1	107789591	uncharacterized LOC107789591
nta-r.1	107832114	uncharacterized LOC107832114
osa-u.5	4332326	uncharacterized LOC4332326
zma-u.5	103639335	P-loop containing nucleoside triphosphate hydrolase superfamily protein
tae-r.2	123092686	uncharacterized LOC123092686
tae-r.2	123085357	uncharacterized LOC123085357
tae-r.2	123097986	uncharacterized LOC123097986
hvu-r.1	123449093	uncharacterized LOC123449093
sbi-r.1	8054300	uncharacterized LOC8054300
bdi-r.1	100837229	uncharacterized LOC100837229
cre-r.1	CHLRE_07g347550v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0033314 [list] [network] mitotic DNA replication checkpoint signaling	(23 genes)	IEA
GO:0000077 [list] [network] DNA damage checkpoint signaling	(34 genes)	IEA
GO:0006281 [list] [network] DNA repair	(1192 genes)	IEA

GO CC

GO MF

GO:0003682 [list] [network] chromatin binding	(399 genes)	IEA
GO:0016887 [list] [network] ATP hydrolysis activity	(1360 genes)	IEA
GO:0005524 [list] [network] ATP binding	(5995 genes)	IEA

Protein

XP_048592299.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10

(predict for XP_048592299.1)

Subcellular
localization
TargetP

other 6, chlo 4

(predict for XP_048592299.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106400398	bna-r.1 for 106389520	bra-r.6 for 103832200	ath-u.5 for AT1G77620	ghi-r.1 for 107962509	ghi-r.1 for 107901411	cit-r.1 for 102625992	gma-u.5 for 100815984	gma-u.5 for 100784968	gma-u.5 for 100784209	vvi-u.5 for 104882466	ppo-u.5 for 7469150	ppo-u.5 for 7463160	mtr-u.5 for 11426583	mtr-u.5 for 11417234	sly-u.5 for 101250607	sot-r.1 for 102600450	nta-r.1 for 107789591	nta-r.1 for 107832114	osa-u.5 for 4332326	zma-u.5 for 103639335	tae-r.2 for 123092686	tae-r.2 for 123085357	tae-r.2 for 123097986	hvu-r.1 for 123449093	sbi-r.1 for 8054300	bdi-r.1 for 100837229	cre-r.1 for CHLRE_07g347550v5

Ortholog

Ortholog ID: 8313

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC106400398

telomere length regulation protein elg1-like

uncharacterized LOC103832200

P-loop containing nucleoside triphosphate hydrolases superfamily protein

uncharacterized LOC107962509

uncharacterized LOC107901411

uncharacterized LOC102625992

uncharacterized LOC100815984

uncharacterized LOC100784968

uncharacterized LOC100784209

uncharacterized LOC104882466

uncharacterized LOC7469150

uncharacterized LOC7463160

uncharacterized LOC11426583

uncharacterized LOC11417234

uncharacterized LOC101250607

uncharacterized LOC102600450

uncharacterized LOC107789591

uncharacterized LOC107832114

uncharacterized LOC4332326

P-loop containing nucleoside triphosphate hydrolase superfamily protein

uncharacterized LOC123092686

uncharacterized LOC123085357

uncharacterized LOC123097986

uncharacterized LOC123449093

uncharacterized LOC8054300

uncharacterized LOC100837229

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03022	Basal transcription factors	2
bna03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03022	Basal transcription factors	2
bna03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03030	DNA replication	5
ath03440	Homologous recombination	3
ath03430	Mismatch repair	3
ath03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03440	Homologous recombination	4
ghi04814	Motor proteins	2
ghi03030	DNA replication	2
ghi03410	Base excision repair	2
ghi03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03440	Homologous recombination	4
ghi04814	Motor proteins	2
ghi03030	DNA replication	2
ghi03410	Base excision repair	2
ghi03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03030	DNA replication	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03030	DNA replication	9
gma00240	Pyrimidine metabolism	2
gma01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03015	mRNA surveillance pathway	3
vvi03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03030	DNA replication	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	3
nta00450	Selenocompound metabolism	2
nta00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00450	Selenocompound metabolism	2
nta00970	Aminoacyl-tRNA biosynthesis	2
nta03030	DNA replication	2
nta03410	Base excision repair	2
nta03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	4
osa03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	4
tae03040	Spliceosome	4
tae04148	Efferocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04148	Efferocytosis	3
tae03013	Nucleocytoplasmic transport	3
tae03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04148	Efferocytosis	3
tae03013	Nucleocytoplasmic transport	3
tae03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03018	RNA degradation	2
sbi04120	Ubiquitin mediated proteolysis	2
sbi04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03013	Nucleocytoplasmic transport	3
bdi03040	Spliceosome	2

Expression

Expression pattern

Entrez Gene ID^*

106400398

106389520

103832200

844097

107962509

107901411

102625992

100815984

100784968

100784209

104882466

7469150

7463160

11426583

11417234

101250607

102600450

107789591

107832114

4332326

103639335

123092686

123085357

123097986

123449093

8054300

100837229

66054186

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 106400398 (bna-r.1 coexpression data)

Top 50 enrichment test to 106400398 (bna-r.1 coexpression data)


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	1	1	2	1	3	1	2	2	1	1	2	1	1	3	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106400398 (bna-r.1 coexpression data)

Top 50 enrichment test to 106400398 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**