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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106401092   E3 ubiquitin-protein ligase UPL4 
 ath-u.5   UPL4   ubiquitin-protein ligase 4 
 gma-u.5   100798530   E3 ubiquitin-protein ligase UPL4 
 gma-u.5   100793534   E3 ubiquitin-protein ligase UPL4 
 vvi-u.5   100243094   E3 ubiquitin-protein ligase UPL4 
 ppo-u.5   18100234   E3 ubiquitin-protein ligase UPL4 
 ppo-u.5   7467604   E3 ubiquitin-protein ligase UPL4 
 mtr-u.5   25484050   E3 ubiquitin-protein ligase UPL4 
 sly-u.5   101257890   E3 ubiquitin-protein ligase UPL4 
 osa-u.5   4339037   E3 ubiquitin-protein ligase UPL4 
 zma-u.5   103635779   E3 ubiquitin-protein ligase UPL4 

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Top 50 coexpressed genes to 106401092 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106401092 (bna-r.1 coexpression data)

CoexMap"106401092"


bnaLOC106401092 | Entrez gene ID : 106401092    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 1 2 1 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna04120 [list] [network] Ubiquitin mediated proteolysis (476 genes)
GO BP
GO:0000209 [list] [network] protein polyubiquitination  (267 genes)  IEA  
GO:0043161 [list] [network] proteasome-mediated ubiquitin-dependent protein catabolic process  (494 genes)  IEA  
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (605 genes)  IEA  
Protein XP_048602623.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  chlo 1,  cysk 1  (predict for XP_048602623.1)
Subcellular
localization
TargetP
other 8  (predict for XP_048602623.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106401092

.
ath-u.5
for
UPL4

.
gma-u.5
for
100798530

.
gma-u.5
for
100793534

.
vvi-u.5
for
100243094

.
ppo-u.5
for
18100234

.
ppo-u.5
for
7467604

.
mtr-u.5
for
25484050

.
sly-u.5
for
101257890

.
osa-u.5
for
4339037

.
zma-u.5
for
103635779

.


Ortholog ID: 9107
Species ath gma gma sly osa zma bra bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol UPL4 LOC100798530 LOC100793534 LOC101257890 LOC4339037 LOC103635779 LOC103855501 LOC103850463 LOC100243094 LOC18100234 LOC7467604 LOC25484050 LOC123136312 LOC123182296 LOC123445215 LOC107899676 LOC107948335 LOC106448641 LOC106401092 LOC8072557 LOC102581024 LOC102625174 LOC100831829 LOC107821932 LOC107785213
Function* ubiquitin-protein ligase 4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4 E3 ubiquitin-protein ligase UPL4
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 4
sly04146 Peroxisome 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04136 Autophagy - other 4
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 5
ppo04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 6
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 3
tae04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 8
tae04141 Protein processing in endoplasmic reticulum 3
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 3
bna00540 Lipopolysaccharide biosynthesis 2
bna03008 Ribosome biogenesis in eukaryotes 2
bna04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 3
bna03008 Ribosome biogenesis in eukaryotes 2
bna04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 3
sbi00562 Inositol phosphate metabolism 2
sbi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04146 Peroxisome 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 3
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 4
nta00592 alpha-Linolenic acid metabolism 4
nta03040 Spliceosome 2
nta00564 Glycerophospholipid metabolism 2
nta00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 5
nta00592 alpha-Linolenic acid metabolism 3
nta03040 Spliceosome 2
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831758 100798530 100793534 101257890 4339037 103635779 103855501 103850463 100243094 18100234 7467604 25484050 123136312 123182296 123445215 107899676 107948335 106448641 106401092 8072557 102581024 102625174 100831829 107821932 107785213
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