ATTED-II : GeneCoexpression result

Species	Gene	Description
bna-r.1	106401180	coilin
ath-u.5	AT1G13030	sphere organelles protein-like protein
gma-u.5	100806980	coilin
gma-u.5	100776892	coilin
vvi-u.5	100256103	coilin
ppo-u.5	18102411	coilin
ppo-u.5	7469039	coilin
mtr-u.5	11427783	coilin
sly-u.5	101246716	coilin
sly-u.5	101246016	coilin-like
osa-u.5	4352003	coilin
zma-u.5	100384247	uncharacterized LOC100384247
zma-u.5	100280055	uncharacterized LOC100280055

functional annotation

KEGG

GO BP

GO:0000387 [list] [network] spliceosomal snRNP assembly

(90 genes)

IEA

GO CC

GO:0015030 [list] [network] Cajal body

(4 genes)

IEA

GO MF

GO:0030620 [list] [network] U2 snRNA binding	(25 genes)	IEA
GO:0030619 [list] [network] U1 snRNA binding	(47 genes)	IEA

Protein

XP_013697096.1 [sequence] [blastp]
XP_048597740.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9	(predict for XP_013697096.1)
nucl 9	(predict for XP_048597740.1)

Subcellular
localization
TargetP

other 5, mito 4	(predict for XP_013697096.1)
other 5, mito 4	(predict for XP_048597740.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106401180	ath-u.5 for AT1G13030	gma-u.5 for 100806980	gma-u.5 for 100776892	vvi-u.5 for 100256103	ppo-u.5 for 18102411	ppo-u.5 for 7469039	mtr-u.5 for 11427783	sly-u.5 for 101246716	sly-u.5 for 101246016	osa-u.5 for 4352003	zma-u.5 for 100384247	zma-u.5 for 100280055

Ortholog ID: 6399

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

coilin

coilin-like

coilin

sphere organelles protein-like protein

coilin

coilin-like

coilin

coilin-like

coilin

uncharacterized LOC107809868

coilin

uncharacterized LOC100280055

uncharacterized LOC100384247

coilin

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	2
bra03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03018	RNA degradation	3
ath03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03410	Base excision repair	4
ghi03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03410	Base excision repair	4
ghi03060	Protein export	2
ghi04075	Plant hormone signal transduction	2
ghi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04626	Plant-pathogen interaction	2
mtr03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	3
sly03020	RNA polymerase	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03013	Nucleocytoplasmic transport	3
sot03018	RNA degradation	2
sot03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	2
nta03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03018	RNA degradation	2
nta03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03440	Homologous recombination	2
osa03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	5
zma03018	RNA degradation	3
zma03015	mRNA surveillance pathway	2
zma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03020	RNA polymerase	3
tae03013	Nucleocytoplasmic transport	2
tae04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	3
sbi00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03020	RNA polymerase	2

Expression

Expression pattern

Entrez Gene ID^*

106401180

106401970

103843087

103871964

837860

107922034

107917465

102620183

100806980

100776892

100256103

18102411

7469039

11427783

101246016

101246716

102604548

102603469

107820583

107809868

4352003

100280055

100384247

123062297

123139527

123447518

8070853

100832685

5718665

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 106401180 (bna-r.1 coexpression data)

Top 50 enrichment test to 106401180 (bna-r.1 coexpression data)


Species	bna	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	sbi	ghi	sot	nta	cre	tae
Paralog	1	1	2	1	2	1	2	1	2	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106401180 (bna-r.1 coexpression data)

Top 50 enrichment test to 106401180 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**