ATTED-II : GeneCoexpression result

Species	Gene	Description
bna-r.1	106401451	PHD finger protein At3g20280
ath-u.5	AT3G20280	RING/FYVE/PHD zinc finger superfamily protein
ath-u.5	AT1G50620	RING/FYVE/PHD zinc finger superfamily protein
gma-u.5	100807139	uncharacterized LOC100807139
gma-u.5	100783208	uncharacterized LOC100783208
vvi-u.5	104877603	uncharacterized LOC104877603
ppo-u.5	7487518	uncharacterized LOC7487518
mtr-u.5	11423387	uncharacterized LOC11423387
sly-u.5	101263491	uncharacterized LOC101263491
sly-u.5	101263625	uncharacterized LOC101263625
osa-u.5	4340852	uncharacterized LOC4340852
osa-u.5	4330546	PHD finger protein At3g20280
zma-u.5	100285969	uncharacterized LOC100285969
zma-u.5	103627658	PHD finger protein At3g20280

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_048612526.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10

(predict for XP_048612526.1)

Subcellular
localization
TargetP

chlo 6, other 5

(predict for XP_048612526.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106401451	ath-u.5 for AT3G20280	ath-u.5 for AT1G50620	gma-u.5 for 100807139	gma-u.5 for 100783208	vvi-u.5 for 104877603	ppo-u.5 for 7487518	mtr-u.5 for 11423387	sly-u.5 for 101263491	sly-u.5 for 101263625	osa-u.5 for 4340852	osa-u.5 for 4330546	zma-u.5 for 100285969	zma-u.5 for 103627658

Ortholog ID: 5116

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

PHD finger protein At3g20280

uncharacterized LOC106415979

PHD finger protein At3g20280

uncharacterized LOC103868613

RING/FYVE/PHD zinc finger superfamily protein

uncharacterized LOC107920675

uncharacterized LOC107926332

uncharacterized LOC102609182

uncharacterized LOC100783208

uncharacterized LOC100807139

uncharacterized LOC104877603

uncharacterized LOC7487518

uncharacterized LOC11423387

uncharacterized LOC101263625

uncharacterized LOC101263491

uncharacterized LOC102598370

uncharacterized LOC102590974

uncharacterized LOC107832656

uncharacterized LOC107793234

PHD finger protein At3g20280

uncharacterized LOC4340852

uncharacterized LOC100285969

PHD finger protein At3g20280

endochitinase A-like

PHD finger protein At3g20280-like

uncharacterized LOC8072851

PHD finger protein At3g20280

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03015	mRNA surveillance pathway	3
bra03030	DNA replication	2
bra03410	Base excision repair	2
bra03420	Nucleotide excision repair	2
bra03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	2
bra03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04814	Motor proteins	2
gma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03250	Viral life cycle - HIV-1	3
sly03015	mRNA surveillance pathway	3
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03083	Polycomb repressive complex	2
osa03013	Nucleocytoplasmic transport	2
osa03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	2
sbi03082	ATP-dependent chromatin remodeling	2
sbi03015	mRNA surveillance pathway	2

Expression

Expression pattern

Entrez Gene ID^*

106357507

106415979

103869339

103868613

841484

821572

107920675

107926332

102609182

100783208

100807139

104877603

7487518

11423387

101263625

101263491

102598370

102590974

107832656

107793234

4330546

4340852

100285969

103627658

123145313

123128208

123405629

110434913

8072851

100842652

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 106401451 (bna-r.1 coexpression data)

Top 50 enrichment test to 106401451 (bna-r.1 coexpression data)


Species	bna	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	sbi	ghi	sot	nta	cre	tae
Paralog	1	2	2	1	1	1	2	2	2	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106401451 (bna-r.1 coexpression data)

Top 50 enrichment test to 106401451 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**