ATTED-II : GeneCoexpression result

Species	Gene	Description
bna-r.1	106401605	protein MADS AFFECTING FLOWERING 5-like
bna-r.1	106433514	agamous-like MADS-box protein AGL31
bra-r.6	103873932	agamous-like MADS-box protein AGL27
bra-r.6	103873930	protein MADS AFFECTING FLOWERING 5
bra-r.6	103857284	MADS-box protein FLOWERING LOCUS C
ath-u.5	MAF1	K-box region and MADS-box transcription factor family protein
ath-u.5	MAF5	K-box region/MADS-box transcription factor family protein
cit-r.1	102618544	agamous-like MADS-box protein MADS2
gma-u.5	AGL3L	agamous-like MADS-box protein AGL3-like
gma-u.5	100804540	MADS-box protein FLOWERING LOCUS C
vvi-u.5	FLC	flowering locus C
vvi-u.5	100241171	MADS-box transcription factor 18
ppo-u.5	7456243	truncated transcription factor CAULIFLOWER A
ppo-u.5	18097112	MADS-box transcription factor 14
sly-u.5	101250404	agamous-like MADS-box protein AGL27
sly-u.5	101247413	MADS-box transcription factor
sly-u.5	MBP15	MADS-box transcription factor MBP15
sot-r.1	102593535	agamous-like MADS-box protein AGL27
sot-r.1	102605245	protein MADS AFFECTING FLOWERING 5-like
nta-r.1	107830078	agamous-like MADS-box protein AGL27
nta-r.1	107824723	agamous-like MADS-box protein AGL27
nta-r.1	107804949	agamous-like MADS-box protein AGL27

Annotation

functional annotation

KEGG

GO BP

GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II

(509 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(9971 genes)

IEA

GO MF

GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding	(792 genes)	IEA
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific	(968 genes)	IEA
GO:0046983 [list] [network] protein dimerization activity	(1531 genes)	IEA

Protein

XP_013697597.1 [sequence] [blastp]
XP_022569532.1 [sequence] [blastp]
XP_022569533.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, plas 2, golg 2, golg_plas 2	(predict for XP_013697597.1)
cyto_nucl 4, cyto 3, mito 3, cyto_E.R. 2, nucl 2, chlo_mito 2	(predict for XP_022569532.1)
nucl 7, plas 1, chlo 1, golg 1, cysk_plas 1, E.R._plas 1, mito_plas 1, cyto_plas 1	(predict for XP_022569533.1)

Subcellular
localization
TargetP

Gene expression

All samples

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106401605	bna-r.1 for 106433514	bra-r.6 for 103873932	bra-r.6 for 103873930	bra-r.6 for 103857284	ath-u.5 for MAF1	ath-u.5 for MAF5	cit-r.1 for 102618544	gma-u.5 for AGL3L	gma-u.5 for 100804540	vvi-u.5 for FLC	vvi-u.5 for 100241171	ppo-u.5 for 7456243	ppo-u.5 for 18097112	sly-u.5 for 101250404	sly-u.5 for 101247413	sly-u.5 for MBP15	sot-r.1 for 102593535	sot-r.1 for 102605245	nta-r.1 for 107830078	nta-r.1 for 107824723	nta-r.1 for 107804949