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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106402248   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10-like 
 bna-r.1   106451997   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 
 bna-r.1   106369517   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like 
 bna-r.1   106368515   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 
 bra-r.6   103856434   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 
 bra-r.6   103842049   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 
 bra-r.6   103869316   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH8 
 ath-u.5   MEE29   helicase domain-containing protein 
 ath-u.5   ESP3   RNA helicase family protein 
 ath-u.5   AT1G26370   RNA helicase family protein 
 ghi-r.1   107898615   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 
 ghi-r.1   107886692   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 
 ghi-r.1   107946014   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 
 cit-r.1   102614514   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 
 cit-r.1   102631410   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 
 cit-r.1   102623010   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 
 gma-u.5   100809559   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 
 gma-u.5   100807162   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 
 gma-u.5   100791029   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 
 vvi-u.5   100257193   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 
 vvi-u.5   100241659   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 
 vvi-u.5   100262984   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 
 ppo-u.5   18105660   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 
 ppo-u.5   18105486   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 
 ppo-u.5   7455416   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 
 mtr-u.5   11407634   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 
 mtr-u.5   11410482   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 
 mtr-u.5   11443762   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 
 sly-u.5   101267328   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 
 sly-u.5   101266273   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 
 sly-u.5   101265161   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 
 sot-r.1   102578155   probable pre-mRNA-splicing factor ATP-dependent RNA helicase 
 sot-r.1   102602289   putative ATP-dependent RNA helicase DHX33 
 sot-r.1   102599135   putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 
 nta-r.1   107761727   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 
 nta-r.1   107768863   putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 
 nta-r.1   107775318   putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 
 osa-u.5   4332645   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3 
 zma-u.5   100281385   ATP-dependent RNA helicase DHX8 
 zma-u.5   103626876   probable pre-mRNA-splicing factor ATP-dependent RNA helicase 
 zma-u.5   100191798   uncharacterized LOC100191798 
 tae-r.2   123054340   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 
 tae-r.2   123131067   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like 
 tae-r.2   123060656   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 
 hvu-r.1   123409329   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 
 hvu-r.1   123449983   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like 
 hvu-r.1   123448799   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3 
 sbi-r.1   8054265   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 
 sbi-r.1   8062407   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 
 sbi-r.1   8064256   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 
 bdi-r.1   100835731   probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 
 bdi-r.1   100834233   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 
 bdi-r.1   100835841   pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like 
 cre-r.1   CHLRE_07g349100v5   uncharacterized protein 
 cre-r.1   CHLRE_03g182950v5   uncharacterized protein 
 cre-r.1   CHLRE_07g329150v5   uncharacterized protein 

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Top 50 coexpressed genes to 106402248 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106402248 (bna-r.1 coexpression data)

CoexMap"106402248"


bnaLOC106402248 | Entrez gene ID : 106402248    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 3 3 3 3 3 3 3 3 3 1 3 3 3 3 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03040 [list] [network] Spliceosome (912 genes)
GO BP
GO:0045943 [list] [network] positive regulation of transcription by RNA polymerase I  (12 genes)  IEA  
GO CC
GO:0005730 [list] [network] nucleolus  (615 genes)  IEA  
GO:0005622 [list] [network] intracellular anatomical structure  (25455 genes)  IEA  
GO MF
GO:0016887 [list] [network] ATP hydrolysis activity  (1360 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5995 genes)  IEA  
Protein XP_048612808.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 3,  nucl 3  (predict for XP_048612808.1)
Subcellular
localization
TargetP
chlo 8  (predict for XP_048612808.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106402248
bna-r.1
for
106451997
bna-r.1
for
106369517
bna-r.1
for
106368515
bra-r.6
for
103856434
bra-r.6
for
103842049
bra-r.6
for
103869316
ath-u.5
for
MEE29
ath-u.5
for
ESP3
ath-u.5
for
AT1G26370
ghi-r.1
for
107898615
ghi-r.1
for
107886692
ghi-r.1
for
107946014
cit-r.1
for
102614514
cit-r.1
for
102631410
cit-r.1
for
102623010
gma-u.5
for
100809559
gma-u.5
for
100807162
gma-u.5
for
100791029
vvi-u.5
for
100257193
vvi-u.5
for
100241659
vvi-u.5
for
100262984
ppo-u.5
for
18105660
ppo-u.5
for
18105486
ppo-u.5
for
7455416
mtr-u.5
for
11407634
mtr-u.5
for
11410482
mtr-u.5
for
11443762
sly-u.5
for
101267328
sly-u.5
for
101266273
sly-u.5
for
101265161
sot-r.1
for
102578155
sot-r.1
for
102602289
sot-r.1
for
102599135
nta-r.1
for
107761727
nta-r.1
for
107768863
nta-r.1
for
107775318
osa-u.5
for
4332645
zma-u.5
for
100281385
zma-u.5
for
103626876
zma-u.5
for
100191798
tae-r.2
for
123054340
tae-r.2
for
123131067
tae-r.2
for
123060656
hvu-r.1
for
123409329
hvu-r.1
for
123449983
hvu-r.1
for
123448799
sbi-r.1
for
8054265
sbi-r.1
for
8062407
sbi-r.1
for
8064256
bdi-r.1
for
100835731
bdi-r.1
for
100834233
bdi-r.1
for
100835841
cre-r.1
for
CHLRE_07g349100v5
cre-r.1
for
CHLRE_03g182950v5
cre-r.1
for
CHLRE_07g329150v5


Ortholog ID: 280
Species bna bna bna bra bra bra ath ath ath ghi ghi ghi cit cit cit gma gma gma vvi vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi bdi cre cre cre
Symbol LOC106368515 LOC106357504 LOC106389248 LOC103856434 LOC103842049 LOC103858239 AT1G26370 AT3G62310 AT2G47250 LOC107946014 LOC107906342 LOC107930383 LOC102623010 LOC102618425 LOC102615226 LOC100790809 LOC100787259 LOC100781090 LOC100257193 LOC100262984 LOC100244993 LOC18105660 LOC7481418 LOC7485208 LOC11407634 LOC120580139 LOC25488674 LOC101266273 LOC101265161 LOC101253458 LOC102602289 LOC102594667 LOC102590563 LOC107761727 LOC107768863 LOC107817775 LOC4332645 LOC4329095 LOC100281385 LOC100191798 LOC103649589 LOC123054340 LOC123150349 LOC123164193 LOC123449983 LOC123448425 LOC8064256 LOC8074510 LOC8083713 LOC100835841 LOC100824836 LOC100821046 CHLRE_07g349100v5 CHLRE_03g182950v5 CHLRE_11g467654v5
Function* probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3 RNA helicase family protein RNA helicase family protein RNA helicase family protein probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 putative ATP-dependent RNA helicase DHX33 probable pre-mRNA-splicing factor ATP-dependent RNA helicase probable pre-mRNA-splicing factor ATP-dependent RNA helicase pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 putative pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 ATP-dependent RNA helicase DHX8 uncharacterized LOC100191798 ATP-dependent RNA helicase pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1-like probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3 pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 6
bna03013 Nucleocytoplasmic transport 5
bna03015 mRNA surveillance pathway 3
bna00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03450 Non-homologous end-joining 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00261 Monobactam biosynthesis 3
bna00300 Lysine biosynthesis 3
bna01230 Biosynthesis of amino acids 3
bna03040 Spliceosome 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 5
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00970 Aminoacyl-tRNA biosynthesis 4
ath03040 Spliceosome 4
ath03015 mRNA surveillance pathway 3
ath03013 Nucleocytoplasmic transport 2
ath03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
ath03015 mRNA surveillance pathway 3
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma04120 Ubiquitin mediated proteolysis 3
gma00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
gma03008 Ribosome biogenesis in eukaryotes 2
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 6
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 2
vvi00280 Valine, leucine and isoleucine degradation 2
vvi00410 beta-Alanine metabolism 2
vvi00640 Propanoate metabolism 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04142 Lysosome 3
vvi04144 Endocytosis 3
vvi03440 Homologous recombination 2
vvi03013 Nucleocytoplasmic transport 2
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 3
vvi03082 ATP-dependent chromatin remodeling 2
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 5
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00970 Aminoacyl-tRNA biosynthesis 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 4
mtr03040 Spliceosome 3
mtr03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 3
sly03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03018 RNA degradation 3
sot04120 Ubiquitin mediated proteolysis 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 6
sot04141 Protein processing in endoplasmic reticulum 6
sot04626 Plant-pathogen interaction 3
sot04144 Endocytosis 2
sot03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00970 Aminoacyl-tRNA biosynthesis 5
nta03040 Spliceosome 4
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
zma03050 Proteasome 2
zma03013 Nucleocytoplasmic transport 2
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
zma03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 2
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu00020 Citrate cycle (TCA cycle) 2
hvu00785 Lipoic acid metabolism 2
hvu01200 Carbon metabolism 2
hvu01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 5
sbi03018 RNA degradation 3
sbi03013 Nucleocytoplasmic transport 3
sbi03015 mRNA surveillance pathway 3
sbi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 10
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
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