ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-u.5	KCS5	3-ketoacyl-CoA synthase 5
ath-u.5	KCS6	3-ketoacyl-CoA synthase 6
ath-u.5	KCS2	3-ketoacyl-CoA synthase 2
gma-u.5	100790385	3-ketoacyl-CoA synthase 1
gma-u.5	100794273	3-ketoacyl-CoA synthase 11
gma-u.5	100797395	3-ketoacyl-CoA synthase 11
vvi-u.5	100247295	3-ketoacyl-CoA synthase 1
ppo-u.5	7478795	3-ketoacyl-CoA synthase 1
ppo-u.5	7471569	3-ketoacyl-CoA synthase 11
mtr-u.5	11408155	3-ketoacyl-CoA synthase 6
mtr-u.5	25486760	3-ketoacyl-CoA synthase 11
sly-u.5	101268230	3-ketoacyl-CoA synthase 1
sly-u.5	101258036	3-ketoacyl-CoA synthase 11
sly-u.5	101268257	3-ketoacyl-CoA synthase 11-like
osa-u.5	4350817	3-ketoacyl-CoA synthase 20
osa-u.5	4331714	probable 3-ketoacyl-CoA synthase 20
osa-u.5	4330627	3-ketoacyl-CoA synthase 6
zma-u.5	100279934	3-ketoacyl-CoA synthase 5
zma-u.5	100191621	uncharacterized LOC100191621
zma-u.5	103626218	probable 3-ketoacyl-CoA synthase 20

Top 50 coexpressed genes to KCS5 (ath-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to KCS5 (ath-u.5 coexpression data)

CoexMap"106405329"

[Cytoscape]

Annotation

functional annotation

KEGG

bna00062 [list] [network] Fatty acid elongation (102 genes)

bna04626 [list] [network] Plant-pathogen interaction (721 genes)

GO BP

GO:0006633 [list] [network] fatty acid biosynthetic process

(235 genes)

IEA

GO CC

GO:0016020 [list] [network] membrane

(9970 genes)

IEA

GO MF

GO:0016747 [list] [network] acyltransferase activity, transferring groups other than amino-acyl groups

(954 genes)

IEA

Protein

XP_013701344.1 [sequence] [blastp]

Subcellular
localization
wolf

plas 5, E.R. 3, chlo 1, E.R._vacu 1, cyto_E.R. 1

(predict for XP_013701344.1)

Subcellular
localization
TargetP

scret 9

(predict for XP_013701344.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for KCS5	ath-u.5 for KCS6	ath-u.5 for KCS2	gma-u.5 for 100790385	gma-u.5 for 100794273	gma-u.5 for 100797395	vvi-u.5 for 100247295	ppo-u.5 for 7478795	ppo-u.5 for 7471569	mtr-u.5 for 11408155	mtr-u.5 for 25486760	sly-u.5 for 101268230	sly-u.5 for 101258036	sly-u.5 for 101268257	osa-u.5 for 4350817	osa-u.5 for 4331714	osa-u.5 for 4330627	zma-u.5 for 100279934	zma-u.5 for 100191621	zma-u.5 for 103626218

Ortholog

Ortholog ID: 54

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

KCS10

KCS11

Function^*

3-ketoacyl-CoA synthase 20-like

3-ketoacyl-CoA synthase 10-like

3-ketoacyl-CoA synthase 1

3-ketoacyl-CoA synthase 5

3-ketoacyl-CoA synthase 10

3-ketoacyl-CoA synthase 11

3-ketoacyl-CoA synthase 4

3-ketoacyl-CoA synthase 11

3-ketoacyl-CoA synthase 20-like

3-ketoacyl-CoA synthase 6

3-ketoacyl-CoA synthase 11-like

3-ketoacyl-CoA synthase 1

3-ketoacyl-CoA synthase 6

3-ketoacyl-CoA synthase 1

3-ketoacyl-CoA synthase 20-like

3-ketoacyl-CoA synthase 4

3-ketoacyl-CoA synthase 6-like

3-ketoacyl-CoA synthase 4-like

3-ketoacyl-CoA synthase 11

3-ketoacyl-CoA synthase 6

3-ketoacyl-CoA synthase 10

fatty acid elongase

probable 3-ketoacyl-CoA synthase 20

3-ketoacyl-CoA synthase 11

3-ketoacyl-CoA synthase 10

3-ketoacyl-CoA synthase 20-like

3-ketoacyl-CoA synthase 1

3-ketoacyl-CoA synthase 6

3-ketoacyl-CoA synthase 4

3-ketoacyl-CoA synthase 11

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00062	Fatty acid elongation	7
bna04626	Plant-pathogen interaction	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04626	Plant-pathogen interaction	8
bna00062	Fatty acid elongation	6
bna00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00062	Fatty acid elongation	7
bra04626	Plant-pathogen interaction	7
bra00073	Cutin, suberine and wax biosynthesis	3
bra00561	Glycerolipid metabolism	3
bra00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00062	Fatty acid elongation	5
bra04626	Plant-pathogen interaction	5
bra02010	ABC transporters	5
bra04981	Folate transport and metabolism	3
bra00071	Fatty acid degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00062	Fatty acid elongation	6
ath04626	Plant-pathogen interaction	6
ath02010	ABC transporters	4
ath00561	Glycerolipid metabolism	2
ath00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01240	Biosynthesis of cofactors	7
ath01200	Carbon metabolism	6
ath00780	Biotin metabolism	5
ath00010	Glycolysis / Gluconeogenesis	5
ath00620	Pyruvate metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00062	Fatty acid elongation	8
ghi04626	Plant-pathogen interaction	5
ghi01040	Biosynthesis of unsaturated fatty acids	3
ghi01212	Fatty acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04626	Plant-pathogen interaction	7
ghi00062	Fatty acid elongation	5
ghi00510	N-Glycan biosynthesis	3
ghi00513	Various types of N-glycan biosynthesis	3
ghi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00062	Fatty acid elongation	3
cit04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit02010	ABC transporters	3
cit00062	Fatty acid elongation	3
cit04626	Plant-pathogen interaction	3
cit04981	Folate transport and metabolism	2
cit00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma02010	ABC transporters	4
gma04981	Folate transport and metabolism	4
gma00062	Fatty acid elongation	4
gma04626	Plant-pathogen interaction	4
gma00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00564	Glycerophospholipid metabolism	5
ppo00561	Glycerolipid metabolism	4
ppo00073	Cutin, suberine and wax biosynthesis	2
ppo00062	Fatty acid elongation	2
ppo04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00073	Cutin, suberine and wax biosynthesis	5
ppo04146	Peroxisome	2
ppo00062	Fatty acid elongation	2
ppo04626	Plant-pathogen interaction	2
ppo02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00073	Cutin, suberine and wax biosynthesis	2
mtr02010	ABC transporters	2
mtr00062	Fatty acid elongation	2
mtr04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00062	Fatty acid elongation	5
mtr00561	Glycerolipid metabolism	4
mtr00564	Glycerophospholipid metabolism	4
mtr04626	Plant-pathogen interaction	3
mtr00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00062	Fatty acid elongation	4
sly04626	Plant-pathogen interaction	4
sly00564	Glycerophospholipid metabolism	2
sly00073	Cutin, suberine and wax biosynthesis	2
sly04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00062	Fatty acid elongation	4
sly04626	Plant-pathogen interaction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00260	Glycine, serine and threonine metabolism	2
sot00290	Valine, leucine and isoleucine biosynthesis	2
sot01200	Carbon metabolism	2
sot01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00062	Fatty acid elongation	3
nta04626	Plant-pathogen interaction	3
nta00940	Phenylpropanoid biosynthesis	2
nta00061	Fatty acid biosynthesis	2
nta00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00062	Fatty acid elongation	4
nta04626	Plant-pathogen interaction	4
nta04016	MAPK signaling pathway - plant	4
nta04075	Plant hormone signal transduction	4
nta04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00062	Fatty acid elongation	5
osa04626	Plant-pathogen interaction	3
osa01040	Biosynthesis of unsaturated fatty acids	2
osa01212	Fatty acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00062	Fatty acid elongation	6
zma04626	Plant-pathogen interaction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00062	Fatty acid elongation	3
tae04626	Plant-pathogen interaction	3
tae00073	Cutin, suberine and wax biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00062	Fatty acid elongation	6
tae04626	Plant-pathogen interaction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00062	Fatty acid elongation	5
hvu04626	Plant-pathogen interaction	4
hvu00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00062	Fatty acid elongation	5
hvu04626	Plant-pathogen interaction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00062	Fatty acid elongation	6
sbi04626	Plant-pathogen interaction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00062	Fatty acid elongation	4
sbi04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00062	Fatty acid elongation	3
bdi04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00600	Sphingolipid metabolism	3
cre04382	Cornified envelope formation	2
cre00564	Glycerophospholipid metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

106451725

106400786

103844626

103840573

817165

817205

107927815

107901193

102608675

102613293

100815887

100266256

7478795

7489345

11408155

11435384

101268230

101262858

102593540

102579720

107817728

107820032

4332090

4331836

100282655

100285225

123140104

123157783

123449620

123448355

8078854

8085289

100837378

100844547

5722708

The preparation time of this page was 0.2 [sec].


Species	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	ghi	sot	nta	cre	tae
Paralog	3	3	1	2	2	3	3	3	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to KCS5 (ath-u.5 coexpression data)

Top 50 enrichment test to KCS5 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**