ATTED-II : GeneCoexpression result

Species	Gene	Description
bna-r.1	106405833	uncharacterized LOC106405833
ath-u.5	AT5G43930	Transducin family protein / WD-40 repeat family protein
ath-u.5	AT1G04140	Transducin family protein / WD-40 repeat family protein
gma-u.5	100817857	uncharacterized LOC100817857
gma-u.5	100794246	uncharacterized LOC100794246
vvi-u.5	100263178	uncharacterized LOC100263178
vvi-u.5	100246400	uncharacterized LOC100246400
ppo-u.5	7464413	uncharacterized LOC7464413
ppo-u.5	7461479	uncharacterized LOC7461479
mtr-u.5	11443501	uncharacterized LOC11443501
mtr-u.5	25484186	uncharacterized LOC25484186
sly-u.5	101247260	uncharacterized LOC101247260
sly-u.5	101245950	uncharacterized LOC101245950
osa-u.5	4329056	uncharacterized LOC4329056
osa-u.5	4346650	uncharacterized LOC4346650
zma-u.5	103641534	Protein RAE1
zma-u.5	103646691	uncharacterized LOC103646691
zma-u.5	100382568	Transducin family protein / WD-40 repeat family protein

Annotation

functional annotation

KEGG

GO BP

GO:0006914 [list] [network] autophagy

(162 genes)

IEA

GO CC

GO:0043231 [list] [network] intracellular membrane-bounded organelle

(18248 genes)

IEA

GO MF

GO:0005515 [list] [network] protein binding

(12789 genes)

IEA

Protein

XP_013701834.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10

(predict for XP_013701834.2)

Subcellular
localization
TargetP

chlo 9

(predict for XP_013701834.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106405833	ath-u.5 for AT5G43930	ath-u.5 for AT1G04140	gma-u.5 for 100817857	gma-u.5 for 100794246	vvi-u.5 for 100263178	vvi-u.5 for 100246400	ppo-u.5 for 7464413	ppo-u.5 for 7461479	mtr-u.5 for 11443501	mtr-u.5 for 25484186	sly-u.5 for 101247260	sly-u.5 for 101245950	osa-u.5 for 4329056	osa-u.5 for 4346650	zma-u.5 for 103641534	zma-u.5 for 103646691	zma-u.5 for 100382568

Ortholog

Ortholog ID: 3984

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized LOC125577216

uncharacterized LOC125591571

uncharacterized LOC103843670

uncharacterized LOC103836591

Transducin family protein / WD-40 repeat family protein

uncharacterized LOC107929113

uncharacterized LOC107952744

uncharacterized LOC102630449

uncharacterized LOC102626177

uncharacterized LOC100794246

uncharacterized LOC100817857

uncharacterized LOC100263178

uncharacterized LOC100246400

uncharacterized LOC7461479

uncharacterized LOC7464413

uncharacterized LOC11443501

uncharacterized LOC25484186

uncharacterized LOC101247260

uncharacterized LOC101245950

uncharacterized LOC102599622

uncharacterized LOC102584562

uncharacterized LOC107822349

uncharacterized LOC107828304

uncharacterized LOC4346650

uncharacterized LOC4329056

Transducin family protein / WD-40 repeat family protein

Protein RAE1

uncharacterized LOC123114386

uncharacterized LOC123123889

uncharacterized LOC123395164

uncharacterized LOC8064654

uncharacterized LOC8086481

uncharacterized LOC100829808

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03018	RNA degradation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	3
bra03018	RNA degradation	3
bra03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00760	Nicotinate and nicotinamide metabolism	2
ghi01240	Biosynthesis of cofactors	2
ghi04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01200	Carbon metabolism	3
cit01230	Biosynthesis of amino acids	3
cit00500	Starch and sucrose metabolism	2
cit00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03013	Nucleocytoplasmic transport	2
vvi03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03018	RNA degradation	2
mtr03015	mRNA surveillance pathway	2
mtr00230	Purine metabolism	2
mtr01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	3
sly03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	2
sot04148	Efferocytosis	2
sot04142	Lysosome	2
sot04144	Endocytosis	2
sot05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	4
nta02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03083	Polycomb repressive complex	3
tae03250	Viral life cycle - HIV-1	3
tae04016	MAPK signaling pathway - plant	2
tae04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae02010	ABC transporters	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03018	RNA degradation	2
sbi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04016	MAPK signaling pathway - plant	2

Expression

Expression pattern

Entrez Gene ID^*

125577216

125591571

103843670

103836591

839272

834415

107929113

107952744

102630449

102626177

100794246

100817857

100263178

100246400

7461479

7464413

11443501

25484186

101247260

101245950

102599622

102584562

107822349

107828304

4346650

4329056

100382568

103641534

123114386

123123889

123395164

8064654

8086481

100829808

66056533

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 106405833 (bna-r.1 coexpression data)

Top 50 enrichment test to 106405833 (bna-r.1 coexpression data)


Species	bna	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	sbi	ghi	sot	nta	cre	tae
Paralog	1	2	2	2	2	2	2	2	3	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106405833 (bna-r.1 coexpression data)

Top 50 enrichment test to 106405833 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**