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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106406710   protein PROTON GRADIENT REGULATION 5, chloroplastic 
 bna-r.1   106439788   protein PROTON GRADIENT REGULATION 5, chloroplastic 
 bna-r.1   106426763   protein PROTON GRADIENT REGULATION 5, chloroplastic 
 bra-r.6   103860336   protein PROTON GRADIENT REGULATION 5, chloroplastic 
 ath-u.5   PGR5   proton gradient regulation 5 
 ghi-r.1   107930413   protein PROTON GRADIENT REGULATION 5, chloroplastic 
 ghi-r.1   121232276   protein PROTON GRADIENT REGULATION 5, chloroplastic 
 ghi-r.1   107936101   protein PROTON GRADIENT REGULATION 5, chloroplastic 
 cit-r.1   102610738   protein PROTON GRADIENT REGULATION 5, chloroplastic 
 gma-u.5   100782797   protein PROTON GRADIENT REGULATION 5, chloroplastic-like 
 gma-u.5   100500247   uncharacterized LOC100500247 
 vvi-u.5   100254512   protein PROTON GRADIENT REGULATION 5, chloroplastic 
 ppo-u.5   7480884   protein PROTON GRADIENT REGULATION 5, chloroplastic 
 ppo-u.5   7459985   protein PROTON GRADIENT REGULATION 5, chloroplastic 
 mtr-u.5   11434471   protein PROTON GRADIENT REGULATION 5, chloroplastic 
 sly-u.5   101262255   protein PROTON GRADIENT REGULATION 5, chloroplastic 
 sot-r.1   102602963   protein PROTON GRADIENT REGULATION 5, chloroplastic 
 nta-r.1   107780686   protein PROTON GRADIENT REGULATION 5, chloroplastic-like 
 nta-r.1   107770124   protein PROTON GRADIENT REGULATION 5, chloroplastic 
 osa-u.5   4346358   protein PROTON GRADIENT REGULATION 5, chloroplastic 
 zma-u.5   103653244   protein PROTON GRADIENT REGULATION 5, chloroplastic 
 zma-u.5   100285080   uncharacterized LOC100285080 
 tae-r.2   123169118   protein PROTON GRADIENT REGULATION 5, chloroplastic 
 tae-r.2   123161281   protein PROTON GRADIENT REGULATION 5, chloroplastic 
 tae-r.2   123154066   protein PROTON GRADIENT REGULATION 5, chloroplastic 
 hvu-r.1   123409139   protein PROTON GRADIENT REGULATION 5, chloroplastic 
 sbi-r.1   8056916   protein PROTON GRADIENT REGULATION 5, chloroplastic 
 bdi-r.1   100844291   protein PROTON GRADIENT REGULATION 5, chloroplastic 
 cre-r.1   CHLRE_05g242400v5   uncharacterized protein 

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Top 50 coexpressed genes to 106406710 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106406710 (bna-r.1 coexpression data)

CoexMap"106406710"


bnaLOC106406710 | Entrez gene ID : 106406710    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 1 3 1 2 1 2 1 1 1 2 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009644 [list] [network] response to high light intensity  (7 genes)  IEA  
GO:0009773 [list] [network] photosynthetic electron transport in photosystem I  (28 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1821 genes)  IEA  
GO MF
GO:0009055 [list] [network] electron transfer activity  (324 genes)  IEA  
Protein XP_013702879.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  cyto_E.R. 3,  nucl 2,  chlo 1,  plas 1,  pero 1  (predict for XP_013702879.1)
Subcellular
localization
TargetP
other 3  (predict for XP_013702879.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106406710
bna-r.1
for
106439788
bna-r.1
for
106426763
bra-r.6
for
103860336
ath-u.5
for
PGR5
ghi-r.1
for
107930413
ghi-r.1
for
121232276
ghi-r.1
for
107936101
cit-r.1
for
102610738
gma-u.5
for
100782797
gma-u.5
for
100500247
vvi-u.5
for
100254512
ppo-u.5
for
7480884
ppo-u.5
for
7459985
mtr-u.5
for
11434471
sly-u.5
for
101262255
sot-r.1
for
102602963
nta-r.1
for
107780686
nta-r.1
for
107770124
osa-u.5
for
4346358
zma-u.5
for
103653244
zma-u.5
for
100285080
tae-r.2
for
123169118
tae-r.2
for
123161281
tae-r.2
for
123154066
hvu-r.1
for
123409139
sbi-r.1
for
8056916
bdi-r.1
for
100844291
cre-r.1
for
CHLRE_05g242400v5


Ortholog ID: 7145
Species bna bna bna bra ath ghi ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC106406710 LOC106439788 LOC106426763 LOC103860336 PGR5 LOC107930413 LOC107936101 LOC107929161 LOC102610738 LOC100782797 LOC100500247 LOC100254512 LOC7480884 LOC7459985 LOC11434471 LOC101262255 LOC102602963 LOC107780686 LOC107770124 LOC4346358 LOC103653244 LOC100285080 LOC123169118 LOC123161281 LOC123154066 LOC123409139 LOC8056916 LOC100844291 CHLRE_05g242400v5
Function* protein PROTON GRADIENT REGULATION 5, chloroplastic protein PROTON GRADIENT REGULATION 5, chloroplastic protein PROTON GRADIENT REGULATION 5, chloroplastic protein PROTON GRADIENT REGULATION 5, chloroplastic proton gradient regulation 5 protein PROTON GRADIENT REGULATION 5, chloroplastic protein PROTON GRADIENT REGULATION 5, chloroplastic protein PROTON GRADIENT REGULATION 5, chloroplastic protein PROTON GRADIENT REGULATION 5, chloroplastic protein PROTON GRADIENT REGULATION 5, chloroplastic-like uncharacterized LOC100500247 protein PROTON GRADIENT REGULATION 5, chloroplastic protein PROTON GRADIENT REGULATION 5, chloroplastic protein PROTON GRADIENT REGULATION 5, chloroplastic protein PROTON GRADIENT REGULATION 5, chloroplastic protein PROTON GRADIENT REGULATION 5, chloroplastic protein PROTON GRADIENT REGULATION 5, chloroplastic protein PROTON GRADIENT REGULATION 5, chloroplastic-like protein PROTON GRADIENT REGULATION 5, chloroplastic protein PROTON GRADIENT REGULATION 5, chloroplastic protein PROTON GRADIENT REGULATION 5, chloroplastic uncharacterized LOC100285080 protein PROTON GRADIENT REGULATION 5, chloroplastic protein PROTON GRADIENT REGULATION 5, chloroplastic protein PROTON GRADIENT REGULATION 5, chloroplastic protein PROTON GRADIENT REGULATION 5, chloroplastic protein PROTON GRADIENT REGULATION 5, chloroplastic protein PROTON GRADIENT REGULATION 5, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00860 Porphyrin metabolism 3
bra00010 Glycolysis / Gluconeogenesis 2
bra00030 Pentose phosphate pathway 2
bra00051 Fructose and mannose metabolism 2
bra00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 4
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00010 Glycolysis / Gluconeogenesis 2
gma00030 Pentose phosphate pathway 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 3
ppo00710 Carbon fixation by Calvin cycle 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01200 Carbon metabolism 2
mtr00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00270 Cysteine and methionine metabolism 2
nta00350 Tyrosine metabolism 2
nta00360 Phenylalanine metabolism 2
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 2
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 5
tae01200 Carbon metabolism 5
tae00010 Glycolysis / Gluconeogenesis 3
tae00030 Pentose phosphate pathway 3
tae00051 Fructose and mannose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 3
tae01200 Carbon metabolism 3
tae00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00710 Carbon fixation by Calvin cycle 5
tae01200 Carbon metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 3
hvu00195 Photosynthesis 2
hvu00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00195 Photosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106406710 106439788 106426763 103860336 815111 107930413 107936101 107929161 102610738 100782797 100500247 100254512 7480884 7459985 11434471 101262255 102602963 107780686 107770124 4346358 103653244 100285080 123169118 123161281 123154066 123409139 8056916 100844291 5726277
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