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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106406811   coproporphyrinogen-III oxidase 1, chloroplastic-like 
 bna-r.1   106401564   coproporphyrinogen-III oxidase 1, chloroplastic-like 
 bna-r.1   106423089   coproporphyrinogen-III oxidase 1, chloroplastic 
 bra-r.6   103844502   coproporphyrinogen-III oxidase 1, chloroplastic 
 bra-r.6   103843696   coproporphyrinogen-III oxidase 1, chloroplastic 
 ath-u.5   LIN2   Coproporphyrinogen III oxidase 
 ghi-r.1   107955637   oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic 
 ghi-r.1   107950258   oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic 
 ghi-r.1   107915439   oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic 
 cit-r.1   102614806   oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic 
 gma-u.5   CPX   coproporphyrinogen oxidase 
 vvi-u.5   100243271   oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic 
 ppo-u.5   7485528   coproporphyrinogen-III oxidase 1, chloroplastic 
 mtr-u.5   11425298   oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic 
 sly-u.5   101260673   coproporphyrinogen-III oxidase 1, chloroplastic 
 sot-r.1   102595391   oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic-like 
 sot-r.1   102600601   coproporphyrinogen-III oxidase 1, chloroplastic 
 nta-r.1   107766888   oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic-like 
 nta-r.1   107815524   oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic 
 osa-u.5   4336951   oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic-like 
 zma-u.5   100500945   necrotic4 
 tae-r.2   123046485   oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic 
 tae-r.2   123054338   oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic 
 hvu-r.1   123403778   oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic-like 
 hvu-r.1   123427648   oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic 
 sbi-r.1   8085159   oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic 
 sbi-r.1   8063950   oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic 
 bdi-r.1   100832294   oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic 
 bdi-r.1   100830026   oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic-like 
 cre-r.1   CHLRE_02g085450v5   uncharacterized protein 

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Top 50 coexpressed genes to 106406811 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106406811 (bna-r.1 coexpression data)

CoexMap"106406811"


bnaLOC106406811 | Entrez gene ID : 106406811    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 1 3 1 1 1 1 1 1 2 2 1 1 2 2 2 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00860 [list] [network] Porphyrin metabolism (154 genes)
bna01240 [list] [network] Biosynthesis of cofactors (726 genes)
GO BP
GO:0006782 [list] [network] protoporphyrinogen IX biosynthetic process  (5 genes)  IEA  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (365 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (16489 genes)  IEA  
GO MF
GO:0004109 [list] [network] coproporphyrinogen oxidase activity  (7 genes)  IEA  
Protein XP_013703002.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_013703002.2)
Subcellular
localization
TargetP
chlo 9  (predict for XP_013703002.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106406811
bna-r.1
for
106401564
bna-r.1
for
106423089
bra-r.6
for
103844502
bra-r.6
for
103843696
ath-u.5
for
LIN2
ghi-r.1
for
107955637
ghi-r.1
for
107950258
ghi-r.1
for
107915439
cit-r.1
for
102614806
gma-u.5
for
CPX
vvi-u.5
for
100243271
ppo-u.5
for
7485528
mtr-u.5
for
11425298
sly-u.5
for
101260673
sot-r.1
for
102595391
sot-r.1
for
102600601
nta-r.1
for
107766888
nta-r.1
for
107815524
osa-u.5
for
4336951
zma-u.5
for
100500945
tae-r.2
for
123046485
tae-r.2
for
123054338
hvu-r.1
for
123403778
hvu-r.1
for
123427648
sbi-r.1
for
8085159
sbi-r.1
for
8063950
bdi-r.1
for
100832294
bdi-r.1
for
100830026
cre-r.1
for
CHLRE_02g085450v5


Ortholog ID: 5897
Species bna bna bna bra bra ath ghi ghi ghi cit gma vvi ppo mtr sly sot sot nta nta osa zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC106406811 LOC106401564 LOC106423089 LOC103844502 LOC103843696 LIN2 LOC107955637 LOC107950258 LOC107915439 LOC102614806 CPX LOC100243271 LOC7485528 LOC11425298 LOC101260673 LOC102595391 LOC102600601 LOC107766888 LOC107815524 LOC4336951 LOC100500945 LOC123054338 LOC123144728 LOC123403778 LOC123427648 LOC8085159 LOC8063950 LOC100832294 LOC100830026 CHLRE_02g085450v5
Function* coproporphyrinogen-III oxidase 1, chloroplastic-like coproporphyrinogen-III oxidase 1, chloroplastic-like coproporphyrinogen-III oxidase 1, chloroplastic coproporphyrinogen-III oxidase 1, chloroplastic coproporphyrinogen-III oxidase 1, chloroplastic Coproporphyrinogen III oxidase oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic coproporphyrinogen oxidase oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic coproporphyrinogen-III oxidase 1, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic coproporphyrinogen-III oxidase 1, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic-like coproporphyrinogen-III oxidase 1, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic-like oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic-like necrotic4 oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic-like oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic oxygen-dependent coproporphyrinogen-III oxidase, chloroplastic-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 3
bna00860 Porphyrin metabolism 3
bna01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00860 Porphyrin metabolism 3
bna01240 Biosynthesis of cofactors 3
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 4
bna00860 Porphyrin metabolism 3
bna01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 10
bra00860 Porphyrin metabolism 3
bra01240 Biosynthesis of cofactors 3
bra03060 Protein export 2
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 3
bra03040 Spliceosome 3
bra00860 Porphyrin metabolism 3
bra01240 Biosynthesis of cofactors 3
bra00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00860 Porphyrin metabolism 11
ath01240 Biosynthesis of cofactors 9
ath03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 5
ghi01240 Biosynthesis of cofactors 5
ghi04626 Plant-pathogen interaction 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi00261 Monobactam biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 4
ghi01240 Biosynthesis of cofactors 4
ghi00710 Carbon fixation by Calvin cycle 3
ghi01200 Carbon metabolism 3
ghi00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 5
ghi01240 Biosynthesis of cofactors 5
ghi03010 Ribosome 4
ghi04626 Plant-pathogen interaction 2
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00860 Porphyrin metabolism 3
cit01240 Biosynthesis of cofactors 3
cit03010 Ribosome 3
cit00010 Glycolysis / Gluconeogenesis 3
cit00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 7
gma01240 Biosynthesis of cofactors 7
gma03060 Protein export 2
gma03010 Ribosome 2
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00900 Terpenoid backbone biosynthesis 2
ppo00290 Valine, leucine and isoleucine biosynthesis 2
ppo00770 Pantothenate and CoA biosynthesis 2
ppo01210 2-Oxocarboxylic acid metabolism 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00860 Porphyrin metabolism 6
mtr01240 Biosynthesis of cofactors 6
mtr03010 Ribosome 2
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
mtr00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00860 Porphyrin metabolism 7
sly01240 Biosynthesis of cofactors 7
sly03010 Ribosome 4
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 5
sot01240 Biosynthesis of cofactors 5
sot04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00860 Porphyrin metabolism 9
sot01240 Biosynthesis of cofactors 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00860 Porphyrin metabolism 4
nta01240 Biosynthesis of cofactors 4
nta00260 Glycine, serine and threonine metabolism 3
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
nta01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 5
nta00860 Porphyrin metabolism 4
nta00061 Fatty acid biosynthesis 2
nta00620 Pyruvate metabolism 2
nta00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
osa01240 Biosynthesis of cofactors 3
osa00970 Aminoacyl-tRNA biosynthesis 3
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
zma01230 Biosynthesis of amino acids 2
zma00970 Aminoacyl-tRNA biosynthesis 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 3
tae01240 Biosynthesis of cofactors 3
tae00710 Carbon fixation by Calvin cycle 2
tae01200 Carbon metabolism 2
tae01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00860 Porphyrin metabolism 5
tae01200 Carbon metabolism 4
tae00010 Glycolysis / Gluconeogenesis 3
tae00710 Carbon fixation by Calvin cycle 3
tae01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 3
hvu00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
hvu00860 Porphyrin metabolism 4
hvu01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00860 Porphyrin metabolism 7
sbi01240 Biosynthesis of cofactors 6
sbi00010 Glycolysis / Gluconeogenesis 5
sbi00071 Fatty acid degradation 2
sbi00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 11
bdi00860 Porphyrin metabolism 3
bdi01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00860 Porphyrin metabolism 9
cre01240 Biosynthesis of cofactors 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106406811 106401564 106423089 103844502 103843696 839489 107955637 107950258 107915439 102614806 100818277 100243271 7485528 11425298 101260673 102595391 102600601 107766888 107815524 4336951 100500945 123054338 123144728 123403778 123427648 8085159 8063950 100832294 100830026 5727381
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