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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106409174   plastocyanin major isoform, chloroplastic 
 ath-u.5   AT5G13310   uncharacterized protein 
 ath-u.5   AT5G13970   midasin-like protein 
 gma-u.5   100820108   uncharacterized LOC100820108 
 gma-u.5   100819106   uncharacterized LOC100819106 
 vvi-u.5   100242886   uncharacterized LOC100242886 
 vvi-u.5   104880872   uncharacterized LOC104880872 
 ppo-u.5   7481180   uncharacterized LOC7481180 
 ppo-u.5   7488605   uncharacterized LOC7488605 
 ppo-u.5   7458011   uncharacterized LOC7458011 
 mtr-u.5   11427063   clumping factor B 
 sly-u.5   101246682   uncharacterized LOC101246682 
 sly-u.5   101252477   uncharacterized LOC101252477 
 osa-u.5   107280807   uncharacterized LOC107280807 
 zma-u.5   100382401   uncharacterized LOC100382401 
 zma-u.5   100382918   uncharacterized LOC100382918 

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Top 50 coexpressed genes to 106409174 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106409174 (bna-r.1 coexpression data)

CoexMap"106409174"


bnaLOC106409174 | Entrez gene ID : 106409174    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 2 2 2 3 1 2 1 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00195 [list] [network] Photosynthesis (310 genes)
GO BP
GO CC
GO:0009543 [list] [network] chloroplast thylakoid lumen  (17 genes)  IEA  
GO MF
GO:0005507 [list] [network] copper ion binding  (203 genes)  IEA  
Protein XP_022561738.1 [sequence] [blastp]
XP_048619749.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_022561738.1)
mito 4,  nucl 4,  chlo 2,  cyto_mito 2,  mito_plas 2  (predict for XP_048619749.1)
Subcellular
localization
TargetP
chlo 9  (predict for XP_022561738.1)
mito 3  (predict for XP_048619749.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106409174

.
ath-u.5
for
AT5G13310

.
ath-u.5
for
AT5G13970

.
gma-u.5
for
100820108

.
gma-u.5
for
100819106

.
vvi-u.5
for
100242886

.
vvi-u.5
for
104880872

.
ppo-u.5
for
7481180

.
ppo-u.5
for
7488605

.
ppo-u.5
for
7458011

.
mtr-u.5
for
11427063

.
sly-u.5
for
101246682

.
sly-u.5
for
101252477

.
osa-u.5
for
107280807

.
zma-u.5
for
100382401

.
zma-u.5
for
100382918

.


Ortholog ID: 4783
Species ath ath gma gma sly sly osa zma zma bra bra vvi vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sot sot cit cit bdi bdi nta nta
Symbol AT5G13970 AT5G13310 LOC100820108 LOC100819106 LOC101252477 LOC101246682 LOC107280807 LOC100382401 LOC100382918 LOC103846524 LOC103846582 LOC100242886 LOC104880872 LOC7481180 LOC7488605 LOC11427063 LOC123189092 LOC123053177 LOC123426576 LOC107935850 LOC107909515 LOC125579035 LOC106370613 LOC8072028 LOC102579968 LOC102581607 LOC102616331 LOC102623791 LOC100846360 LOC100842327 LOC107761958 LOC107782227
Function* midasin-like protein uncharacterized protein uncharacterized LOC100820108 uncharacterized LOC100819106 uncharacterized LOC101252477 uncharacterized LOC101246682 uncharacterized LOC107280807 uncharacterized LOC100382401 uncharacterized LOC100382918 uncharacterized LOC103846524 uncharacterized LOC103846582 uncharacterized LOC100242886 uncharacterized LOC104880872 uncharacterized LOC7481180 uncharacterized LOC7488605 clumping factor B cyclic nucleotide-gated cation channel beta-1 uncharacterized LOC123053177 cyclic nucleotide-gated cation channel beta-1-like uncharacterized LOC107935850 uncharacterized LOC107909515 uncharacterized LOC125579035 uncharacterized LOC106370613 uncharacterized LOC8072028 uncharacterized LOC102579968 uncharacterized LOC102581607 hypothetical protein uncharacterized LOC102623791 uncharacterized LOC100846360 uncharacterized LOC100842327 uncharacterized LOC107761958 uncharacterized LOC107782227
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 3
ath03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03083 Polycomb repressive complex 2
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03022 Basal transcription factors 2
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 3
vvi01200 Carbon metabolism 3
vvi03015 mRNA surveillance pathway 2
vvi00190 Oxidative phosphorylation 2
vvi00785 Lipoic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae03040 Spliceosome 3
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 8
tae03040 Spliceosome 3
tae04144 Endocytosis 3
tae03015 mRNA surveillance pathway 3
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 5
hvu03040 Spliceosome 3
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03015 mRNA surveillance pathway 2
sot04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831245 831172 100820108 100819106 101252477 101246682 107280807 100382401 100382918 103846524 103846582 100242886 104880872 7481180 7488605 11427063 123189092 123053177 123426576 107935850 107909515 125579035 106370613 8072028 102579968 102581607 102616331 102623791 100846360 100842327 107761958 107782227
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