ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	AT5G63135	transcription termination factor
gma-u.5	100527060	uncharacterized LOC100527060
gma-u.5	100803289	uncharacterized LOC100803289
vvi-u.5	100260492	uncharacterized LOC100260492
ppo-u.5	7456906	uncharacterized LOC7456906
mtr-u.5	25489535	chromatin-remodeling ATPase INO80
sly-u.5	101267394	uncharacterized LOC101267394
osa-u.5	107275248	uncharacterized LOC107275248
zma-u.5	103653702	uncharacterized LOC103653702
zma-u.5	100276844	uncharacterized LOC100276844

functional annotation

KEGG

GO BP

GO:0090266 [list] [network] regulation of mitotic cell cycle spindle assembly checkpoint

(4 genes)

IEA

GO CC

GO:0005680 [list] [network] anaphase-promoting complex

(60 genes)

IEA

GO MF

Protein

XP_013705577.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cyto_nucl 6, cyto 2

(predict for XP_013705577.1)

Subcellular
localization
TargetP

chlo 3, other 3

(predict for XP_013705577.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT5G63135 .	gma-u.5 for 100527060 .	gma-u.5 for 100803289 .	vvi-u.5 for 100260492 .	ppo-u.5 for 7456906 .	mtr-u.5 for 25489535 .	sly-u.5 for 101267394 .	osa-u.5 for 107275248 .	zma-u.5 for 103653702 .	zma-u.5 for 100276844 .

Ortholog ID: 8664

Species

ath

gma

sly

osa

zma

bra

vvi

ppo

mtr

tae

hvu

ghi

bna

sbi

sot

cit

bdi

nta

Symbol

Function^*

transcription termination factor

uncharacterized LOC100527060

uncharacterized LOC100803289

uncharacterized LOC101267394

uncharacterized LOC107275248

uncharacterized LOC103653702

uncharacterized LOC100276844

nucleolin

uncharacterized LOC100260492

uncharacterized LOC7456906

chromatin-remodeling ATPase INO80

uncharacterized LOC123127576

uncharacterized LOC123137308

uncharacterized LOC123406135

uncharacterized LOC107933509

uncharacterized LOC107946859

nucleolin

uncharacterized LOC8070588

uncharacterized LOC102580941

uncharacterized LOC102620907

anaphase-promoting complex subunit 15

uncharacterized LOC107816975

uncharacterized LOC107812198

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	3
gma04144	Endocytosis	2
gma04145	Phagosome	2
gma04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	4
gma01230	Biosynthesis of amino acids	2
gma03010	Ribosome	2
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03050	Proteasome	7
osa00190	Oxidative phosphorylation	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	3
zma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04712	Circadian rhythm - plant	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03020	RNA polymerase	2
mtr03420	Nucleotide excision repair	2
mtr03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00190	Oxidative phosphorylation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	2
hvu04141	Protein processing in endoplasmic reticulum	2
hvu04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	9
ghi03060	Protein export	3
ghi03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03040	Spliceosome	10
ghi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00190	Oxidative phosphorylation	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	2
sbi03022	Basal transcription factors	2
sbi03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03050	Proteasome	6
nta00230	Purine metabolism	2
nta00240	Pyrimidine metabolism	2
nta01232	Nucleotide metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03050	Proteasome	6
nta00562	Inositol phosphate metabolism	2
nta00920	Sulfur metabolism	2
nta04070	Phosphatidylinositol signaling system	2

Expression

Expression pattern

Entrez Gene ID^*

836434

100527060

100803289

101267394

107275248

103653702

100276844

103837459

103873734

100260492

7456906

25489535

123127576

123137308

123406135

107933509

107946859

106422616

8070588

102580941

102620907

100827503

107816975

107812198

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT5G63135 (ath-u.5 coexpression data)

Top 50 enrichment test to AT5G63135 (ath-u.5 coexpression data)


Species	ath	gma	vvi	ppo	mtr	sly	osa	zma	ghi	cit	tae	bdi	sbi	cre	bra	hvu	nta	bna	sot
Paralog	1	2	1	1	1	1	1	2	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT5G63135 (ath-u.5 coexpression data)

Top 50 enrichment test to AT5G63135 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**