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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106411339   ATP synthase subunit delta, chloroplastic 
 bna-r.1   106422134   ATP synthase subunit delta, chloroplastic 
 bna-r.1   106360967   ATP synthase subunit delta, chloroplastic 
 bna-r.1   106397081   ATP synthase subunit delta, chloroplastic 
 bra-r.6   103829310   ATP synthase subunit delta, chloroplastic-like 
 bra-r.6   103838839   ATP synthase subunit delta, chloroplastic 
 bra-r.6   103858533   ATP synthase subunit delta, chloroplastic 
 ath-u.5   ATPD   F-type H+-transporting ATPase subunit delta 
 ghi-r.1   107936179   ATP synthase subunit delta, chloroplastic 
 ghi-r.1   107932688   ATP synthase subunit delta, chloroplastic 
 cit-r.1   102610762   ATP synthase subunit delta, chloroplastic 
 gma-u.5   100819224   ATP synthase delta chain, chloroplastic 
 gma-u.5   100815063   ATP synthase delta chain, chloroplastic 
 vvi-u.5   100251062   ATP synthase delta chain, chloroplastic 
 ppo-u.5   18104499   ATP synthase delta chain, chloroplastic 
 ppo-u.5   7467447   ATP synthase subunit delta, chloroplastic 
 mtr-u.5   11407939   ATP synthase delta chain, chloroplastic 
 sly-u.5   101254882   ATP synthase delta chain, chloroplastic 
 sot-r.1   102591175   ATP synthase delta chain, chloroplastic 
 nta-r.1   107797795   ATP synthase delta chain, chloroplastic 
 nta-r.1   107821979   ATP synthase delta chain, chloroplastic-like 
 osa-u.5   9270776   ATP synthase delta chain, chloroplastic 
 zma-u.5   100281924   ATP synthase delta chain 
 zma-u.5   103627748   ATP synthase delta chain, chloroplastic 
 tae-r.2   123145464   ATP synthase delta chain, chloroplastic 
 tae-r.2   123138205   ATP synthase delta chain, chloroplastic 
 tae-r.2   123128356   ATP synthase delta chain, chloroplastic 
 hvu-r.1   123402736   ATP synthase delta chain, chloroplastic-like 
 sbi-r.1   8066424   ATP synthase delta chain, chloroplastic 
 bdi-r.1   100828294   ATP synthase delta chain, chloroplastic 
 cre-r.1   CHLRE_11g467569v5   uncharacterized protein 

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Top 50 coexpressed genes to 106411339 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106411339 (bna-r.1 coexpression data)

CoexMap"106411339"


bnaLOC106411339 | Entrez gene ID : 106411339    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 1 2 1 2 1 2 1 1 1 2 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00190 [list] [network] Oxidative phosphorylation (589 genes)
bna00195 [list] [network] Photosynthesis (310 genes)
GO BP
GO:0009773 [list] [network] photosynthetic electron transport in photosystem I  (28 genes)  IEA  
GO:0009772 [list] [network] photosynthetic electron transport in photosystem II  (83 genes)  IEA  
GO:0015986 [list] [network] proton motive force-driven ATP synthesis  (131 genes)  IEA  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (359 genes)  IEA  
GO MF
GO:0046933 [list] [network] proton-transporting ATP synthase activity, rotational mechanism  (108 genes)  IEA  
Protein XP_013707543.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for XP_013707543.1)
Subcellular
localization
TargetP
chlo 8,  mito 5  (predict for XP_013707543.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106411339
bna-r.1
for
106422134
bna-r.1
for
106360967
bna-r.1
for
106397081
bra-r.6
for
103829310
bra-r.6
for
103838839
bra-r.6
for
103858533
ath-u.5
for
ATPD
ghi-r.1
for
107936179
ghi-r.1
for
107932688
cit-r.1
for
102610762
gma-u.5
for
100819224
gma-u.5
for
100815063
vvi-u.5
for
100251062
ppo-u.5
for
18104499
ppo-u.5
for
7467447
mtr-u.5
for
11407939
sly-u.5
for
101254882
sot-r.1
for
102591175
nta-r.1
for
107797795
nta-r.1
for
107821979
osa-u.5
for
9270776
zma-u.5
for
100281924
zma-u.5
for
103627748
tae-r.2
for
123145464
tae-r.2
for
123138205
tae-r.2
for
123128356
hvu-r.1
for
123402736
sbi-r.1
for
8066424
bdi-r.1
for
100828294
cre-r.1
for
CHLRE_11g467569v5


Ortholog ID: 6600
Species bna bna bna bra bra bra ath ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC106411339 LOC106422134 LOC106438494 LOC103829310 LOC103838839 LOC103858533 ATPD LOC107936179 LOC107932688 LOC102610762 LOC100819224 LOC100815063 LOC100251062 LOC18104499 LOC7467447 LOC11407939 LOC101254882 LOC102591175 LOC107797795 LOC107821979 LOC9270776 LOC100281924 LOC103627748 LOC123145464 LOC123138205 LOC123128356 LOC123402736 LOC8066424 LOC100828294 CHLRE_11g467569v5
Function* ATP synthase subunit delta, chloroplastic ATP synthase subunit delta, chloroplastic ATP synthase subunit delta, chloroplastic ATP synthase subunit delta, chloroplastic-like ATP synthase subunit delta, chloroplastic ATP synthase subunit delta, chloroplastic F-type H+-transporting ATPase subunit delta ATP synthase subunit delta, chloroplastic ATP synthase subunit delta, chloroplastic ATP synthase subunit delta, chloroplastic ATP synthase delta chain, chloroplastic ATP synthase delta chain, chloroplastic ATP synthase delta chain, chloroplastic ATP synthase delta chain, chloroplastic ATP synthase subunit delta, chloroplastic ATP synthase delta chain, chloroplastic ATP synthase delta chain, chloroplastic ATP synthase delta chain, chloroplastic ATP synthase delta chain, chloroplastic ATP synthase delta chain, chloroplastic-like ATP synthase delta chain, chloroplastic ATP synthase delta chain ATP synthase delta chain, chloroplastic ATP synthase delta chain, chloroplastic ATP synthase delta chain, chloroplastic ATP synthase delta chain, chloroplastic ATP synthase delta chain, chloroplastic-like ATP synthase delta chain, chloroplastic ATP synthase delta chain, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 2
bna00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 6
bna00190 Oxidative phosphorylation 4
bna00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00195 Photosynthesis 7
bna00190 Oxidative phosphorylation 4
bna00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 5
bra00860 Porphyrin metabolism 2
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00195 Photosynthesis 10
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00195 Photosynthesis 17
ath00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi00195 Photosynthesis 5
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 7
ghi00190 Oxidative phosphorylation 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 10
cit00710 Carbon fixation by Calvin cycle 3
cit01200 Carbon metabolism 3
cit01230 Biosynthesis of amino acids 3
cit00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00195 Photosynthesis 10
gma00190 Oxidative phosphorylation 2
gma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
gma00195 Photosynthesis 3
gma00190 Oxidative phosphorylation 2
gma04626 Plant-pathogen interaction 2
gma00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00195 Photosynthesis 12
vvi01200 Carbon metabolism 3
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 6
ppo00710 Carbon fixation by Calvin cycle 4
ppo00630 Glyoxylate and dicarboxylate metabolism 3
ppo03010 Ribosome 3
ppo00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00195 Photosynthesis 8
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 2
mtr00195 Photosynthesis 2
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 10
sly00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00195 Photosynthesis 10
sot00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta00195 Photosynthesis 4
nta00860 Porphyrin metabolism 3
nta00190 Oxidative phosphorylation 2
nta00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 6
nta00195 Photosynthesis 4
nta00860 Porphyrin metabolism 4
nta00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 7
osa00190 Oxidative phosphorylation 3
osa01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 16
zma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00195 Photosynthesis 4
zma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 9
tae00195 Photosynthesis 9
tae00561 Glycerolipid metabolism 3
tae00566 Sulfoquinovose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 9
tae00195 Photosynthesis 9
tae01200 Carbon metabolism 3
tae00196 Photosynthesis - antenna proteins 2
tae00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00195 Photosynthesis 10
tae00190 Oxidative phosphorylation 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00710 Carbon fixation by Calvin cycle 6
hvu01200 Carbon metabolism 6
hvu01230 Biosynthesis of amino acids 4
hvu03010 Ribosome 3
hvu00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
sbi00195 Photosynthesis 3
sbi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01200 Carbon metabolism 5
bdi00710 Carbon fixation by Calvin cycle 4
bdi01230 Biosynthesis of amino acids 3
bdi00190 Oxidative phosphorylation 2
bdi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00710 Carbon fixation by Calvin cycle 5
cre01200 Carbon metabolism 5
cre00195 Photosynthesis 5
cre00190 Oxidative phosphorylation 4
cre00030 Pentose phosphate pathway 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106411339 106422134 106438494 103829310 103838839 103858533 826551 107936179 107932688 102610762 100819224 100815063 100251062 18104499 7467447 11407939 101254882 102591175 107797795 107821979 9270776 100281924 103627748 123145464 123138205 123128356 123402736 8066424 100828294 5726953
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