ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	106412672	uncharacterized LOC106412672
bna-r.1	106386935	uncharacterized LOC106386935
bna-r.1	106371654	uncharacterized LOC106371654
bna-r.1	106419730	uncharacterized LOC106419730
bra-r.6	103856518	uncharacterized LOC103856518
bra-r.6	103845546	uncharacterized LOC103845546
bra-r.6	103829180	uncharacterized LOC103829180
ath-u.5	AT5G22450	spectrin beta chain, brain
ghi-r.1	107891517	uncharacterized LOC107891517
ghi-r.1	107949030	uncharacterized LOC107949030
ghi-r.1	107932484	uncharacterized LOC107932484
cit-r.1	102612602	uncharacterized LOC102612602
cit-r.1	102613986	uncharacterized LOC102613986
gma-u.5	100817881	uncharacterized LOC100817881
gma-u.5	100801531	uncharacterized LOC100801531
gma-u.5	100793513	uncharacterized LOC100793513
vvi-u.5	100243326	uncharacterized LOC100243326
vvi-u.5	100252823	uncharacterized LOC100252823
ppo-u.5	7460055	uncharacterized LOC7460055
ppo-u.5	7477167	uncharacterized LOC7477167
ppo-u.5	7490896	uncharacterized LOC7490896
mtr-u.5	11443445	uncharacterized LOC11443445
mtr-u.5	25485584	uncharacterized LOC25485584
sly-u.5	101267370	uncharacterized LOC101267370
sot-r.1	102606376	uncharacterized LOC102606376
nta-r.1	107805201	uncharacterized LOC107805201
nta-r.1	107830585	uncharacterized LOC107830585
osa-u.5	4324005	uncharacterized LOC4324005
osa-u.5	4337571	uncharacterized LOC4337571
zma-u.5	103637325	uncharacterized LOC103637325
zma-u.5	103629278	uncharacterized LOC103629278
tae-r.2	123063614	uncharacterized LOC123063614
tae-r.2	123072758	uncharacterized LOC123072758
tae-r.2	123103754	uncharacterized LOC123103754
hvu-r.1	123431011	uncharacterized LOC123431011
hvu-r.1	123445643	uncharacterized LOC123445643
sbi-r.1	8068645	uncharacterized LOC8068645
bdi-r.1	100835632	uncharacterized LOC100835632
bdi-r.1	100824795	uncharacterized LOC100824795

Top 50 coexpressed genes to 106412672 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 106412672 (bna-r.1 coexpression data)

CoexMap"106412672"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_048623314.1 [sequence] [blastp]
XP_048623315.1 [sequence] [blastp]
XP_048623316.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9	(predict for XP_048623314.1)
nucl 9	(predict for XP_048623315.1)
nucl 9	(predict for XP_048623316.1)

Subcellular
localization
TargetP

chlo 8	(predict for XP_048623314.1)
chlo 8	(predict for XP_048623315.1)
chlo 8	(predict for XP_048623316.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106412672	bna-r.1 for 106386935	bna-r.1 for 106371654	bna-r.1 for 106419730	bra-r.6 for 103856518	bra-r.6 for 103845546	bra-r.6 for 103829180	ath-u.5 for AT5G22450	ghi-r.1 for 107891517	ghi-r.1 for 107949030	ghi-r.1 for 107932484	cit-r.1 for 102612602	cit-r.1 for 102613986	gma-u.5 for 100817881	gma-u.5 for 100801531	gma-u.5 for 100793513	vvi-u.5 for 100243326	vvi-u.5 for 100252823	ppo-u.5 for 7460055	ppo-u.5 for 7477167	ppo-u.5 for 7490896	mtr-u.5 for 11443445	mtr-u.5 for 25485584	sly-u.5 for 101267370	sot-r.1 for 102606376	nta-r.1 for 107805201	nta-r.1 for 107830585	osa-u.5 for 4324005	osa-u.5 for 4337571	zma-u.5 for 103637325	zma-u.5 for 103629278	tae-r.2 for 123063614	tae-r.2 for 123072758	tae-r.2 for 123103754	hvu-r.1 for 123431011	hvu-r.1 for 123445643	sbi-r.1 for 8068645	bdi-r.1 for 100835632	bdi-r.1 for 100824795

Ortholog

Ortholog ID: 4291

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC106412672

uncharacterized LOC106371654

uncharacterized LOC106419730

uncharacterized LOC103856518

uncharacterized LOC103845546

uncharacterized LOC103829180

spectrin beta chain, brain

uncharacterized LOC107891517

uncharacterized LOC107949030

uncharacterized LOC107932484

uncharacterized LOC102612602

uncharacterized LOC102613986

uncharacterized LOC100817881

uncharacterized LOC100793513

uncharacterized LOC100784211

uncharacterized LOC100243326

uncharacterized LOC100252823

uncharacterized LOC7477167

uncharacterized LOC7490896

uncharacterized LOC18098127

uncharacterized LOC11443445

uncharacterized LOC25485584

uncharacterized LOC101267370

uncharacterized LOC102606376

uncharacterized LOC107805201

uncharacterized LOC107830585

uncharacterized LOC4324005

uncharacterized LOC4337571

uncharacterized LOC103637325

uncharacterized LOC103629278

uncharacterized LOC123063614

uncharacterized LOC123103754

uncharacterized LOC123179885

uncharacterized LOC123431011

uncharacterized LOC123445643

uncharacterized LOC8068645

uncharacterized LOC100835632

uncharacterized LOC100824795

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00310	Lysine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03083	Polycomb repressive complex	3
gma03250	Viral life cycle - HIV-1	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04144	Endocytosis	3
vvi04142	Lysosome	2
vvi00020	Citrate cycle (TCA cycle)	2
vvi00630	Glyoxylate and dicarboxylate metabolism	2
vvi01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03083	Polycomb repressive complex	2
ppo03250	Viral life cycle - HIV-1	2
ppo03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04142	Lysosome	3
mtr03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04142	Lysosome	5
sot04144	Endocytosis	5
sot05100	Bacterial invasion of epithelial cells	3
sot04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00562	Inositol phosphate metabolism	2
nta04070	Phosphatidylinositol signaling system	2
nta04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00562	Inositol phosphate metabolism	2
nta04070	Phosphatidylinositol signaling system	2
nta04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	2
osa03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03040	Spliceosome	3
osa03082	ATP-dependent chromatin remodeling	3
osa03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03015	mRNA surveillance pathway	3
tae04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03250	Viral life cycle - HIV-1	3
tae00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04136	Autophagy - other	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03082	ATP-dependent chromatin remodeling	2

Expression

Expression pattern

Entrez Gene ID^*

106412672

106371654

106419730

103856518

103845546

103829180

832306

107891517

107949030

107932484

102612602

102613986

100817881

100793513

100784211

100243326

100252823

7477167

7490896

18098127

11443445

25485584

101267370

102606376

107805201

107830585

4324005

4337571

103637325

103629278

123063614

123103754

123179885

123431011

123445643

8068645

100835632

100824795

The preparation time of this page was 0.2 [sec].


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	1	3	2	3	2	3	2	1	1	2	2	2	3	2	1	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106412672 (bna-r.1 coexpression data)

Top 50 enrichment test to 106412672 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**