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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1  106413880  protein SHI RELATED SEQUENCE 6-like 
 bna-r.1  106414258  protein SHI RELATED SEQUENCE 6-like 
 bna-r.1  106431378  protein SHI RELATED SEQUENCE 6 
 bna-r.1  106445463  protein SHI RELATED SEQUENCE 6-like 
 bra-r.6  103863234  protein SHI RELATED SEQUENCE 6 
 bra-r.6  103841356  protein SHI RELATED SEQUENCE 6 
 ghi-r.1  107896388  protein SHI RELATED SEQUENCE 6 
 ghi-r.1  107915152  protein SHI RELATED SEQUENCE 6 
 gma-u.5  100790311  protein LATERAL ROOT PRIMORDIUM 1 
 ppo-u.5  18094338  protein LATERAL ROOT PRIMORDIUM 1 
 ppo-u.5  7460242  protein SHI RELATED SEQUENCE 6 
 mtr-u.5  11445184  protein LATERAL ROOT PRIMORDIUM 1 

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Top 50 coexpressed genes to 106413880 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106413880 (bna-r.1 coexpression data)

CoexMap"106413880"


bnaLOC106413880 | Entrez gene ID : 106413880
Species bna bra ghi gma ppo mtr hvu sot bdi sly nta vvi osa tae zma cre sbi ath cit
Paralog 4 2 2 1 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (935 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3791 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (6522 genes)  IEA  
Protein XP_048597102.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  nucl 4,  mito 1,  extr 1  (predict for XP_048597102.1)
Subcellular
localization
TargetP
chlo 4,  mito 3  (predict for XP_048597102.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

bna-r.1
for
106413880


bna-r.1
for
106414258


bna-r.1
for
106431378


bna-r.1
for
106445463


bra-r.6
for
103863234


bra-r.6
for
103841356


ghi-r.1
for
107896388


ghi-r.1
for
107915152


gma-u.5
for
100790311


ppo-u.5
for
18094338


ppo-u.5
for
7460242


mtr-u.5
for
11445184



Ortholog ID: 13436
Species bna bna bna bra bra ghi ghi gma ppo ppo mtr
Symbol LOC106413880 LOC106431378 LOC106415444 LOC103863234 LOC103841356 LOC107896388 LOC107915152 LOC100790311 LOC18094338 LOC7460242 LOC11445184
Function* protein SHI RELATED SEQUENCE 6-like protein SHI RELATED SEQUENCE 6 protein SHI RELATED SEQUENCE 5-like protein SHI RELATED SEQUENCE 6 protein SHI RELATED SEQUENCE 6 protein SHI RELATED SEQUENCE 6 protein SHI RELATED SEQUENCE 6 protein LATERAL ROOT PRIMORDIUM 1 protein LATERAL ROOT PRIMORDIUM 1 protein SHI RELATED SEQUENCE 6 protein LATERAL ROOT PRIMORDIUM 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00562 Inositol phosphate metabolism 2
bra04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106413880 106431378 106415444 103863234 103841356 107896388 107915152 100790311 18094338 7460242 11445184
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