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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT3G60180   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-u.5   AT4G25280   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ath-u.5   PYR6   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 gma-u.5   100777369   UMP-CMP kinase 
 gma-u.5   100500111   UMP-CMP kinase family protein 
 gma-u.5   100806842   UMP-CMP kinase 
 vvi-u.5   100248550   adenylate kinase-like 
 vvi-u.5   100241478   UMP-CMP kinase 3 
 ppo-u.5   18105025   UMP-CMP kinase 3 
 ppo-u.5   7483783   UMP-CMP kinase 3 
 mtr-u.5   11425503   UMP-CMP kinase 3 
 mtr-u.5   25491834   UMP-CMP kinase 
 mtr-u.5   11405787   UMP-CMP kinase 
 sly-u.5   101249532   UMP-CMP kinase 
 sly-u.5   101259471   UMP-CMP kinase 3 
 sly-u.5   101243930   UMP-CMP kinase 3 
 osa-u.5   4343960   UMP-CMP kinase 3-like 
 osa-u.5   4339882   UMP-CMP kinase 1-like 
 osa-u.5   4334909   UMP-CMP kinase 2-like 
 zma-u.5   100282335   uncharacterized LOC100282335 
 zma-u.5   100283047   uncharacterized LOC100283047 
 zma-u.5   100281735   UMP/CMP kinase 1 

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Top 50 coexpressed genes to AT3G60180 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G60180 (ath-u.5 coexpression data)

CoexMap"106414614"


bnaLOC106414614 | Entrez gene ID : 106414614    
Species ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna ghi
Paralog 3 3 2 2 3 3 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00240 [list] [network] Pyrimidine metabolism (199 genes)
bna01232 [list] [network] Nucleotide metabolism (244 genes)
bna01240 [list] [network] Biosynthesis of cofactors (726 genes)
GO BP
GO:0046705 [list] [network] CDP biosynthetic process  (11 genes)  IEA  
GO:0006225 [list] [network] UDP biosynthetic process  (17 genes)  IEA  
GO:0006207 [list] [network] 'de novo' pyrimidine nucleobase biosynthetic process  (31 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (16489 genes)  IEA  
GO MF
GO:0033862 [list] [network] UMP kinase activity  (17 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5995 genes)  IEA  
Protein XP_013710694.1 [sequence] [blastp]
XP_013710695.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 2,  golg 1,  chlo 1,  extr 1,  golg_plas 1  (predict for XP_013710694.1)
cyto 4,  nucl 2,  extr 2,  cyto_pero 2,  cyto_E.R. 2  (predict for XP_013710695.1)
Subcellular
localization
TargetP
other 8,  chlo 3  (predict for XP_013710694.1)
other 8,  chlo 3  (predict for XP_013710695.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
AT3G60180

.
ath-u.5
for
AT4G25280

.
ath-u.5
for
PYR6

.
gma-u.5
for
100777369

.
gma-u.5
for
100500111

.
gma-u.5
for
100806842

.
vvi-u.5
for
100248550

.
vvi-u.5
for
100241478

.
ppo-u.5
for
18105025

.
ppo-u.5
for
7483783

.
mtr-u.5
for
11425503

.
mtr-u.5
for
25491834

.
mtr-u.5
for
11405787

.
sly-u.5
for
101249532

.
sly-u.5
for
101259471

.
sly-u.5
for
101243930

.
osa-u.5
for
4343960

.
osa-u.5
for
4339882

.
osa-u.5
for
4334909

.
zma-u.5
for
100282335

.
zma-u.5
for
100283047

.
zma-u.5
for
100281735

.


Ortholog ID: 1113
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi ppo ppo mtr mtr tae hvu hvu ghi ghi bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT3G60180 PYR6 LOC100500111 LOC100777369 LOC101243930 LOC101259471 LOC4334909 LOC9267059 LOC100193828 LOC100281735 LOC103863071 LOC103841868 LOC100241478 LOC7476752 LOC7486802 LOC25491834 LOC11405787 LOC123044142 LOC123407220 LOC123407223 LOC107904290 LOC107933483 LOC125574913 CHLRE_10g438650v5 LOC8067908 LOC8055365 LOC102583881 LOC102603990 LOC102622017 LOC102611020 LOC100841564 LOC100829558 LOC107831858 LOC107779924
Function* P-loop containing nucleoside triphosphate hydrolases superfamily protein P-loop containing nucleoside triphosphate hydrolases superfamily protein UMP-CMP kinase family protein UMP-CMP kinase UMP-CMP kinase 3 UMP-CMP kinase 3 UMP-CMP kinase 2-like UMP-CMP kinase 4-like uncharacterized LOC100193828 UMP/CMP kinase 1 probable UMP-CMP kinase 2 probable UMP-CMP kinase 1 UMP-CMP kinase 3 UMP-CMP kinase UMP-CMP kinase 3 UMP-CMP kinase UMP-CMP kinase UMP-CMP kinase 3 UMP-CMP kinase 4-like UMP-CMP kinase 4-like UMP-CMP kinase 3 probable UMP-CMP kinase 2 UMP-CMP kinase 3-like uncharacterized protein UMP-CMP kinase 1 UMP-CMP kinase 4 UMP-CMP kinase 3-like UMP-CMP kinase 3-like UMP-CMP kinase UMP-CMP kinase 3 UMP-CMP kinase 1 UMP-CMP kinase 2 UMP-CMP kinase 3 UMP-CMP kinase 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00071 Fatty acid degradation 4
ath01212 Fatty acid metabolism 4
ath00592 alpha-Linolenic acid metabolism 3
ath01200 Carbon metabolism 2
ath01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 4
ath04070 Phosphatidylinositol signaling system 4
ath04075 Plant hormone signal transduction 4
ath04626 Plant-pathogen interaction 4
ath01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01232 Nucleotide metabolism 4
gma04144 Endocytosis 3
gma00240 Pyrimidine metabolism 2
gma01240 Biosynthesis of cofactors 2
gma00230 Purine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 7
sly01230 Biosynthesis of amino acids 5
sly01250 Biosynthesis of nucleotide sugars 4
sly00541 Biosynthesis of various nucleotide sugars 3
sly00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03015 mRNA surveillance pathway 3
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00240 Pyrimidine metabolism 2
zma01232 Nucleotide metabolism 2
zma01240 Biosynthesis of cofactors 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 4
vvi04144 Endocytosis 3
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 4
ppo01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00240 Pyrimidine metabolism 2
mtr01232 Nucleotide metabolism 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 2
mtr00240 Pyrimidine metabolism 2
mtr01232 Nucleotide metabolism 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00520 Amino sugar and nucleotide sugar metabolism 6
tae01250 Biosynthesis of nucleotide sugars 6
tae01240 Biosynthesis of cofactors 6
tae00040 Pentose and glucuronate interconversions 3
tae00053 Ascorbate and aldarate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 2
hvu00240 Pyrimidine metabolism 2
hvu01232 Nucleotide metabolism 2
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
hvu01200 Carbon metabolism 2
hvu04146 Peroxisome 2
hvu00240 Pyrimidine metabolism 2
hvu01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00240 Pyrimidine metabolism 8
ghi01232 Nucleotide metabolism 8
ghi01240 Biosynthesis of cofactors 4
ghi00230 Purine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 2
ghi00020 Citrate cycle (TCA cycle) 2
ghi00270 Cysteine and methionine metabolism 2
ghi00566 Sulfoquinovose metabolism 2
ghi00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00240 Pyrimidine metabolism 7
bna01232 Nucleotide metabolism 7
bna01240 Biosynthesis of cofactors 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 3
sot04142 Lysosome 3
sot04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04136 Autophagy - other 3
sot00600 Sphingolipid metabolism 2
sot04142 Lysosome 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
cit03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00520 Amino sugar and nucleotide sugar metabolism 3
cit01250 Biosynthesis of nucleotide sugars 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00240 Pyrimidine metabolism 2
bdi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01232 Nucleotide metabolism 6
nta00230 Purine metabolism 4
nta04820 Cytoskeleton in muscle cells 2
nta00240 Pyrimidine metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04144 Endocytosis 2
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825188 832710 100500111 100777369 101243930 101259471 4334909 9267059 100193828 100281735 103863071 103841868 100241478 7476752 7486802 25491834 11405787 123044142 123407220 123407223 107904290 107933483 125574913 5715973 8067908 8055365 102583881 102603990 102622017 102611020 100841564 100829558 107831858 107779924
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