ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	106414812	serine incorporator 3-like
bna-r.1	125575067	serine incorporator 3-like
bna-r.1	106387582	serine incorporator 3
bna-r.1	106400929	serine incorporator 3
bra-r.6	103842861	serine incorporator 3
bra-r.6	103854465	probable serine incorporator
bra-r.6	103836002	serine incorporator 3
ath-u.5	AT3G06170	Serinc-domain containing serine and sphingolipid biosynthesis protein
ath-u.5	AT1G16180	Serinc-domain containing serine and sphingolipid biosynthesis protein
ghi-r.1	107927773	serine incorporator 3
ghi-r.1	107961846	probable serine incorporator
ghi-r.1	121214451	serine incorporator 3
cit-r.1	102626140	uncharacterized LOC102626140
cit-r.1	102620987	uncharacterized LOC102620987
gma-u.5	100784295	probable serine incorporator
gma-u.5	100798110	probable serine incorporator
gma-u.5	100814002	probable serine incorporator
vvi-u.5	100258051	uncharacterized LOC100258051
vvi-u.5	100262087	uncharacterized LOC100262087
ppo-u.5	7461332	uncharacterized LOC7461332
ppo-u.5	7455778	uncharacterized LOC7455778
ppo-u.5	7481627	uncharacterized LOC7481627
mtr-u.5	25498411	probable serine incorporator
mtr-u.5	25486073	probable serine incorporator
sly-u.5	101252268	uncharacterized LOC101252268
sly-u.5	101264433	uncharacterized LOC101264433
sot-r.1	102593199	probable serine incorporator
sot-r.1	102605446	serine incorporator 3
nta-r.1	107806293	uncharacterized LOC107806293
nta-r.1	107764708	uncharacterized LOC107764708
nta-r.1	107796094	uncharacterized LOC107796094
osa-u.5	4330983	uncharacterized LOC4330983
osa-u.5	4333235	uncharacterized LOC4333235
zma-u.5	100191916	uncharacterized LOC100191916
zma-u.5	100191588	Serinc-domain containing serine and sphingolipid biosynthesis protein
tae-r.2	123045871	probable serine incorporator
tae-r.2	123128737	probable serine incorporator
tae-r.2	123053745	probable serine incorporator
hvu-r.1	123406316	probable serine incorporator
hvu-r.1	123427098	probable serine incorporator
sbi-r.1	8082731	probable serine incorporator
sbi-r.1	8065680	probable serine incorporator
bdi-r.1	100823985	probable serine incorporator
bdi-r.1	100827107	probable serine incorporator
cre-r.1	CHLRE_09g412803v5	uncharacterized protein

Top 50 coexpressed genes to 106414812 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 106414812 (bna-r.1 coexpression data)

CoexMap"106414812"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0016020 [list] [network] membrane

(9970 genes)

IEA

GO MF

Protein

XP_048597647.1 [sequence] [blastp]
XP_048597648.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 4, chlo 2, cyto_pero 2, cyto_plas 2	(predict for XP_048597647.1)
cyto 4, chlo 2, cyto_pero 2, cyto_plas 2	(predict for XP_048597648.1)

Subcellular
localization
TargetP

scret 5, chlo 4	(predict for XP_048597647.1)
scret 5, chlo 4	(predict for XP_048597648.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106414812	bna-r.1 for 125575067	bna-r.1 for 106387582	bna-r.1 for 106400929	bra-r.6 for 103842861	bra-r.6 for 103854465	bra-r.6 for 103836002	ath-u.5 for AT3G06170	ath-u.5 for AT1G16180	ghi-r.1 for 107927773	ghi-r.1 for 107961846	ghi-r.1 for 121214451	cit-r.1 for 102626140	cit-r.1 for 102620987	gma-u.5 for 100784295	gma-u.5 for 100798110	gma-u.5 for 100814002	vvi-u.5 for 100258051	vvi-u.5 for 100262087	ppo-u.5 for 7461332	ppo-u.5 for 7455778	ppo-u.5 for 7481627	mtr-u.5 for 25498411	mtr-u.5 for 25486073	sly-u.5 for 101252268	sly-u.5 for 101264433	sot-r.1 for 102593199	sot-r.1 for 102605446	nta-r.1 for 107806293	nta-r.1 for 107764708	nta-r.1 for 107796094	osa-u.5 for 4330983	osa-u.5 for 4333235	zma-u.5 for 100191916	zma-u.5 for 100191588	tae-r.2 for 123045871	tae-r.2 for 123128737	tae-r.2 for 123053745	hvu-r.1 for 123406316	hvu-r.1 for 123427098	sbi-r.1 for 8082731	sbi-r.1 for 8065680	bdi-r.1 for 100823985	bdi-r.1 for 100827107	cre-r.1 for CHLRE_09g412803v5

Ortholog

Ortholog ID: 2899

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

serine incorporator 3-like

serine incorporator 3

probable serine incorporator

serine incorporator 3

Serinc-domain containing serine and sphingolipid biosynthesis protein

serine incorporator 3

probable serine incorporator

uncharacterized LOC102626140

uncharacterized LOC102620987

probable serine incorporator

uncharacterized LOC100258051

uncharacterized LOC100262087

uncharacterized LOC7461332

uncharacterized LOC7455778

uncharacterized LOC7481627

probable serine incorporator

uncharacterized LOC101252268

uncharacterized LOC101264433

probable serine incorporator

serine incorporator 3

uncharacterized LOC107806293

uncharacterized LOC107796094

uncharacterized LOC107761085

uncharacterized LOC4330983

uncharacterized LOC4333235

uncharacterized LOC100191916

Serinc-domain containing serine and sphingolipid biosynthesis protein

probable serine incorporator

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	3
bra04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04144	Endocytosis	3
bra04130	SNARE interactions in vesicular transport	2
bra03272	Virion - Hepatitis viruses	2
bra00564	Glycerophospholipid metabolism	2
bra00565	Ether lipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00071	Fatty acid degradation	4
ghi00592	alpha-Linolenic acid metabolism	4
ghi01212	Fatty acid metabolism	4
ghi00220	Arginine biosynthesis	2
ghi01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00071	Fatty acid degradation	4
ghi00592	alpha-Linolenic acid metabolism	4
ghi01212	Fatty acid metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	3
cit04145	Phagosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00270	Cysteine and methionine metabolism	2
gma03420	Nucleotide excision repair	2
gma04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00270	Cysteine and methionine metabolism	2
gma03420	Nucleotide excision repair	2
gma04141	Protein processing in endoplasmic reticulum	2
gma04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00071	Fatty acid degradation	2
gma00280	Valine, leucine and isoleucine degradation	2
gma00380	Tryptophan metabolism	2
gma00410	beta-Alanine metabolism	2
gma00640	Propanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04142	Lysosome	3
vvi00600	Sphingolipid metabolism	2
vvi00603	Glycosphingolipid biosynthesis - globo and isoglobo series	2
vvi00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00270	Cysteine and methionine metabolism	2
vvi00600	Sphingolipid metabolism	2
vvi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04145	Phagosome	3
ppo04142	Lysosome	2
ppo04626	Plant-pathogen interaction	2
ppo04144	Endocytosis	2
ppo04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04145	Phagosome	6
ppo00190	Oxidative phosphorylation	5
ppo04142	Lysosome	4
ppo04144	Endocytosis	2
ppo04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	5
sot04145	Phagosome	4
sot04142	Lysosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	6
nta00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00600	Sphingolipid metabolism	3
nta04142	Lysosome	3
nta00053	Ascorbate and aldarate metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	6
nta00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03272	Virion - Hepatitis viruses	2
osa04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01200	Carbon metabolism	4
osa01240	Biosynthesis of cofactors	4
osa01230	Biosynthesis of amino acids	3
osa00010	Glycolysis / Gluconeogenesis	3
osa00920	Sulfur metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	3
tae04075	Plant hormone signal transduction	2
tae04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04136	Autophagy - other	4
hvu04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04136	Autophagy - other	2
sbi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00280	Valine, leucine and isoleucine degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre04144	Endocytosis	2

Expression

Expression pattern

Entrez Gene ID^*

125575067

106387582

106400929

103842861

103854465

103836002

819791

838187

107927773

107960278

107901915

102626140

102620987

100784295

100798110

100814002

100258051

100262087

7461332

7455778

7481627

25498411

25486073

101252268

101264433

102593199

102605446

107806293

107796094

107761085

4330983

4333235

100191916

100191588

123128737

123145873

123189623

123406316

123427098

8082731

8065680

100823985

100827107

5722316

The preparation time of this page was 0.3 [sec].


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	3	2	3	2	3	2	3	2	2	2	3	2	2	3	2	2	2	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106414812 (bna-r.1 coexpression data)

Top 50 enrichment test to 106414812 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**