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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106415358   lipoyl synthase, mitochondrial 
 bna-r.1   106390779   lipoyl synthase, chloroplastic-like 
 bna-r.1   125581607   lipoyl synthase, chloroplastic-like 
 bna-r.1   106368796   lipoyl synthase, mitochondrial-like 
 bra-r.6   103850698   lipoyl synthase, chloroplastic 
 ath-u.5   LIP1   lipoic acid synthase 1 
 ath-u.5   AT5G08415   Radical SAM superfamily protein 
 ghi-r.1   107920229   lipoyl synthase, mitochondrial 
 ghi-r.1   107908999   lipoyl synthase 1, chloroplastic 
 ghi-r.1   107886923   lipoyl synthase 1, chloroplastic 
 cit-r.1   102612536   lipoyl synthase, mitochondrial 
 cit-r.1   102614207   lipoyl synthase, chloroplastic 
 gma-u.5   100775835   lipoyl synthase 2, mitochondrial 
 gma-u.5   100789911   lipoyl synthase 2, mitochondrial 
 gma-u.5   100802588   lipoyl synthase, chloroplastic 
 vvi-u.5   100243894   lipoyl synthase, chloroplastic 
 vvi-u.5   100251365   lipoyl synthase, mitochondrial 
 ppo-u.5   18108579   lipoyl synthase 2, chloroplastic 
 ppo-u.5   18100990   lipoyl synthase, mitochondrial-like 
 ppo-u.5   7486347   lipoyl synthase, mitochondrial 
 mtr-u.5   25483244   lipoyl synthase, chloroplastic 
 mtr-u.5   25487617   lipoyl synthase, mitochondrial-like 
 sly-u.5   101257453   lipoyl synthase, chloroplastic 
 sly-u.5   101258875   lipoyl synthase, mitochondrial 
 sot-r.1   102601496   lipoyl synthase, chloroplastic 
 sot-r.1   102581126   lipoyl synthase 1, mitochondrial 
 nta-r.1   107789917   lipoyl synthase, chloroplastic 
 nta-r.1   107809305   lipoyl synthase 2, mitochondrial-like 
 nta-r.1   107792991   lipoyl synthase, mitochondrial 
 osa-u.5   4339289   lipoyl synthase 2, chloroplastic-like 
 osa-u.5   4336023   lipoyl synthase, mitochondrial-like 
 osa-u.5   4325595   lipoyl synthase 1, chloroplastic-like 
 zma-u.5   100384288   Lipoyl synthase 2, chloroplastic 
 zma-u.5   100283909   lipoic acid synthetase 
 zma-u.5   100279807   Lipoyl synthase, mitochondrial 
 tae-r.2   123079298   lipoyl synthase 1, chloroplastic 
 tae-r.2   123045637   lipoyl synthase, mitochondrial 
 tae-r.2   123053495   lipoyl synthase, mitochondrial 
 hvu-r.1   123401300   lipoyl synthase 1, chloroplastic-like 
 hvu-r.1   123444514   lipoyl synthase, chloroplastic 
 hvu-r.1   123426889   lipoyl synthase, mitochondrial 
 sbi-r.1   8057459   lipoyl synthase, mitochondrial 
 sbi-r.1   8072124   lipoyl synthase, chloroplastic 
 bdi-r.1   100838790   lipoyl synthase 1, chloroplastic 
 bdi-r.1   100843430   lipoyl synthase, mitochondrial 
 bdi-r.1   100841632   lipoyl synthase 2, chloroplastic 
 cre-r.1   CHLRE_02g114400v5   uncharacterized protein 
 cre-r.1   CHLRE_08g359700v5   uncharacterized protein 

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Top 50 coexpressed genes to 106415358 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106415358 (bna-r.1 coexpression data)

CoexMap"106415358"


bnaLOC106415358 | Entrez gene ID : 106415358    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 2 3 2 3 2 3 2 2 2 3 3 3 3 3 2 3 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00785 [list] [network] Lipoic acid metabolism (104 genes)
bna01240 [list] [network] Biosynthesis of cofactors (726 genes)
GO BP
GO:0009107 [list] [network] lipoate biosynthetic process  (6 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (1831 genes)  IEA  
GO MF
GO:0016992 [list] [network] lipoate synthase activity  (6 genes)  IEA  
GO:0051539 [list] [network] 4 iron, 4 sulfur cluster binding  (99 genes)  IEA  
Protein XP_013711490.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 5,  mito 4,  nucl 1  (predict for XP_013711490.1)
Subcellular
localization
TargetP
mito 8,  chlo 6  (predict for XP_013711490.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106415358
bna-r.1
for
106390779
bna-r.1
for
125581607
bna-r.1
for
106368796
bra-r.6
for
103850698
ath-u.5
for
LIP1
ath-u.5
for
AT5G08415
ghi-r.1
for
107920229
ghi-r.1
for
107908999
ghi-r.1
for
107886923
cit-r.1
for
102612536
cit-r.1
for
102614207
gma-u.5
for
100775835
gma-u.5
for
100789911
gma-u.5
for
100802588
vvi-u.5
for
100243894
vvi-u.5
for
100251365
ppo-u.5
for
18108579
ppo-u.5
for
18100990
ppo-u.5
for
7486347
mtr-u.5
for
25483244
mtr-u.5
for
25487617
sly-u.5
for
101257453
sly-u.5
for
101258875
sot-r.1
for
102601496
sot-r.1
for
102581126
nta-r.1
for
107789917
nta-r.1
for
107809305
nta-r.1
for
107792991
osa-u.5
for
4339289
osa-u.5
for
4336023
osa-u.5
for
4325595
zma-u.5
for
100384288
zma-u.5
for
100283909
zma-u.5
for
100279807
tae-r.2
for
123079298
tae-r.2
for
123045637
tae-r.2
for
123053495
hvu-r.1
for
123401300
hvu-r.1
for
123444514
hvu-r.1
for
123426889
sbi-r.1
for
8057459
sbi-r.1
for
8072124
bdi-r.1
for
100838790
bdi-r.1
for
100843430
bdi-r.1
for
100841632
cre-r.1
for
CHLRE_02g114400v5
cre-r.1
for
CHLRE_08g359700v5


Ortholog ID: 2449
Species bna bna bna bra ath ath ghi ghi ghi cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr sly sly sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi bdi bdi bdi cre cre
Symbol LOC106390779 LOC125581607 LOC106368796 LOC103850698 LIP1 AT5G08415 LOC107920229 LOC107886923 LOC107894131 LOC102612536 LOC102614207 LOC100775835 LOC100789911 LOC100802588 LOC100243894 LOC100251365 LOC18108579 LOC7486347 LOC7494421 LOC25483244 LOC25487617 LOC101257453 LOC101258875 LOC102601496 LOC102581126 LOC107789917 LOC107809305 LOC107792991 LOC4339289 LOC4336023 LOC4325595 LOC100384288 LOC100283909 LOC100279807 LOC123045637 LOC123182592 LOC123139654 LOC123401300 LOC123444514 LOC123426889 LOC8057459 LOC8072124 LOC100838790 LOC100843430 LOC100841632 CHLRE_02g114400v5 CHLRE_08g359700v5
Function* lipoyl synthase, chloroplastic-like lipoyl synthase, chloroplastic-like lipoyl synthase, mitochondrial-like lipoyl synthase, chloroplastic lipoic acid synthase 1 Radical SAM superfamily protein lipoyl synthase, mitochondrial lipoyl synthase 1, chloroplastic lipoyl synthase, mitochondrial lipoyl synthase, mitochondrial lipoyl synthase, chloroplastic lipoyl synthase 2, mitochondrial lipoyl synthase 2, mitochondrial lipoyl synthase, chloroplastic lipoyl synthase, chloroplastic lipoyl synthase, mitochondrial lipoyl synthase 2, chloroplastic lipoyl synthase, mitochondrial lipoyl synthase 1, chloroplastic lipoyl synthase, chloroplastic lipoyl synthase, mitochondrial-like lipoyl synthase, chloroplastic lipoyl synthase, mitochondrial lipoyl synthase, chloroplastic lipoyl synthase 1, mitochondrial lipoyl synthase, chloroplastic lipoyl synthase 2, mitochondrial-like lipoyl synthase, mitochondrial lipoyl synthase 2, chloroplastic-like lipoyl synthase, mitochondrial-like lipoyl synthase 1, chloroplastic-like Lipoyl synthase 2, chloroplastic lipoic acid synthetase Lipoyl synthase, mitochondrial lipoyl synthase, mitochondrial lipoyl synthase 2, chloroplastic lipoyl synthase 2, chloroplastic lipoyl synthase 1, chloroplastic-like lipoyl synthase, chloroplastic lipoyl synthase, mitochondrial lipoyl synthase, mitochondrial lipoyl synthase, chloroplastic lipoyl synthase 1, chloroplastic lipoyl synthase, mitochondrial lipoyl synthase 2, chloroplastic uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 8
bna01200 Carbon metabolism 8
bna00785 Lipoic acid metabolism 7
bna00640 Propanoate metabolism 6
bna01240 Biosynthesis of cofactors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 8
bna01200 Carbon metabolism 8
bna00785 Lipoic acid metabolism 7
bna00640 Propanoate metabolism 6
bna01240 Biosynthesis of cofactors 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 6
bna00785 Lipoic acid metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00620 Pyruvate metabolism 4
bra00785 Lipoic acid metabolism 4
bra01200 Carbon metabolism 4
bra01210 2-Oxocarboxylic acid metabolism 4
bra03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 10
ath00620 Pyruvate metabolism 9
ath00010 Glycolysis / Gluconeogenesis 7
ath00785 Lipoic acid metabolism 7
ath00020 Citrate cycle (TCA cycle) 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 6
ghi00053 Ascorbate and aldarate metabolism 2
ghi04146 Peroxisome 2
ghi00740 Riboflavin metabolism 2
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 10
ghi00010 Glycolysis / Gluconeogenesis 8
ghi00620 Pyruvate metabolism 6
ghi01200 Carbon metabolism 6
ghi00061 Fatty acid biosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01240 Biosynthesis of cofactors 6
ghi00190 Oxidative phosphorylation 4
ghi03250 Viral life cycle - HIV-1 3
ghi03272 Virion - Hepatitis viruses 3
ghi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01230 Biosynthesis of amino acids 3
cit01210 2-Oxocarboxylic acid metabolism 2
cit03013 Nucleocytoplasmic transport 2
cit04141 Protein processing in endoplasmic reticulum 2
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00785 Lipoic acid metabolism 3
gma01240 Biosynthesis of cofactors 3
gma04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01240 Biosynthesis of cofactors 5
gma00785 Lipoic acid metabolism 4
gma00010 Glycolysis / Gluconeogenesis 3
gma00620 Pyruvate metabolism 3
gma01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00061 Fatty acid biosynthesis 11
gma01212 Fatty acid metabolism 11
gma00620 Pyruvate metabolism 10
gma01200 Carbon metabolism 10
gma00010 Glycolysis / Gluconeogenesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 2
vvi00240 Pyrimidine metabolism 2
vvi01240 Biosynthesis of cofactors 2
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 5
vvi00020 Citrate cycle (TCA cycle) 4
vvi01200 Carbon metabolism 4
vvi03050 Proteasome 3
vvi00785 Lipoic acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00785 Lipoic acid metabolism 4
ppo01240 Biosynthesis of cofactors 4
ppo01200 Carbon metabolism 3
ppo00020 Citrate cycle (TCA cycle) 2
ppo00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00785 Lipoic acid metabolism 2
ppo01240 Biosynthesis of cofactors 2
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01200 Carbon metabolism 9
ppo01240 Biosynthesis of cofactors 9
ppo00620 Pyruvate metabolism 8
ppo00785 Lipoic acid metabolism 7
ppo00061 Fatty acid biosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00061 Fatty acid biosynthesis 11
mtr01212 Fatty acid metabolism 11
mtr00620 Pyruvate metabolism 11
mtr01200 Carbon metabolism 11
mtr01240 Biosynthesis of cofactors 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00620 Pyruvate metabolism 8
sly01200 Carbon metabolism 8
sly00785 Lipoic acid metabolism 7
sly00061 Fatty acid biosynthesis 7
sly00010 Glycolysis / Gluconeogenesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 3
sot00061 Fatty acid biosynthesis 3
sot01212 Fatty acid metabolism 3
sot01210 2-Oxocarboxylic acid metabolism 2
sot00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01230 Biosynthesis of amino acids 3
sot01240 Biosynthesis of cofactors 2
sot00300 Lysine biosynthesis 2
sot00470 D-Amino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00785 Lipoic acid metabolism 7
nta01240 Biosynthesis of cofactors 6
nta00010 Glycolysis / Gluconeogenesis 5
nta00020 Citrate cycle (TCA cycle) 5
nta00620 Pyruvate metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 4
nta00785 Lipoic acid metabolism 4
nta01240 Biosynthesis of cofactors 4
nta00010 Glycolysis / Gluconeogenesis 3
nta00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00785 Lipoic acid metabolism 4
nta01240 Biosynthesis of cofactors 4
nta03010 Ribosome 3
nta03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 6
osa01240 Biosynthesis of cofactors 5
osa01230 Biosynthesis of amino acids 3
osa00010 Glycolysis / Gluconeogenesis 3
osa00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00061 Fatty acid biosynthesis 6
osa01210 2-Oxocarboxylic acid metabolism 6
osa01240 Biosynthesis of cofactors 6
osa00785 Lipoic acid metabolism 6
osa01212 Fatty acid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 7
zma00061 Fatty acid biosynthesis 6
zma00785 Lipoic acid metabolism 5
zma01200 Carbon metabolism 5
zma01212 Fatty acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01240 Biosynthesis of cofactors 7
zma00061 Fatty acid biosynthesis 6
zma00785 Lipoic acid metabolism 5
zma01200 Carbon metabolism 5
zma01212 Fatty acid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma00020 Citrate cycle (TCA cycle) 3
zma01200 Carbon metabolism 3
zma00785 Lipoic acid metabolism 3
zma00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01240 Biosynthesis of cofactors 4
tae00785 Lipoic acid metabolism 3
tae00270 Cysteine and methionine metabolism 3
tae00920 Sulfur metabolism 3
tae01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00785 Lipoic acid metabolism 5
tae01240 Biosynthesis of cofactors 5
tae00061 Fatty acid biosynthesis 5
tae00010 Glycolysis / Gluconeogenesis 4
tae01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00785 Lipoic acid metabolism 7
tae00010 Glycolysis / Gluconeogenesis 4
tae00020 Citrate cycle (TCA cycle) 4
tae00620 Pyruvate metabolism 4
tae01200 Carbon metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00270 Cysteine and methionine metabolism 3
hvu03010 Ribosome 3
hvu00020 Citrate cycle (TCA cycle) 2
hvu00566 Sulfoquinovose metabolism 2
hvu00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
hvu04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 4
hvu01200 Carbon metabolism 2
hvu01240 Biosynthesis of cofactors 2
hvu00785 Lipoic acid metabolism 2
hvu04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 3
sbi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 2
sbi00230 Purine metabolism 2
sbi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 2
bdi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01240 Biosynthesis of cofactors 4
bdi01200 Carbon metabolism 4
bdi00010 Glycolysis / Gluconeogenesis 3
bdi00785 Lipoic acid metabolism 3
bdi00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 2
cre00970 Aminoacyl-tRNA biosynthesis 2
cre00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106390779 125581607 106368796 103850698 816619 830740 107920229 107886923 107894131 102612536 102614207 100775835 100789911 100802588 100243894 100251365 18108579 7486347 7494421 25483244 25487617 101257453 101258875 102601496 102581126 107789917 107809305 107792991 4339289 4336023 4325595 100384288 100283909 100279807 123045637 123182592 123139654 123401300 123444514 123426889 8057459 8072124 100838790 100843430 100841632 5725443 5727843
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