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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106415388   mediator of RNA polymerase II transcription subunit 16 
 ath-u.5   SFR6   sensitive to freezing 6 
 gma-u.5   100812938   mediator of RNA polymerase II transcription subunit 16 
 gma-u.5   100793949   mediator of RNA polymerase II transcription subunit 16 
 vvi-u.5   100265327   mediator of RNA polymerase II transcription subunit 16 
 ppo-u.5   7490820   mediator of RNA polymerase II transcription subunit 16 
 ppo-u.5   18102996   mediator of RNA polymerase II transcription subunit 16 
 ppo-u.5   7477418   mediator of RNA polymerase II transcription subunit 16 
 mtr-u.5   25493186   mediator of RNA polymerase II transcription subunit 16 
 sly-u.5   101267765   mediator of RNA polymerase II transcription subunit 16 
 osa-u.5   4349021   mediator of RNA polymerase II transcription subunit 16 
 zma-u.5   100216950   uncharacterized LOC100216950 

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Top 50 coexpressed genes to 106415388 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106415388 (bna-r.1 coexpression data)

CoexMap"106415388"


bnaLOC106415388 | Entrez gene ID : 106415388    
Species bna ath gma vvi ppo mtr sly osa zma hvu cit bra ghi sbi bdi nta tae cre sot
Paralog 1 1 2 1 3 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (5322 genes)  IEA  
GO CC
GO:0016592 [list] [network] mediator complex  (98 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_013711532.2 [sequence] [blastp]
XP_048624242.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  pero 2  (predict for XP_013711532.2)
nucl 7,  pero 2  (predict for XP_048624242.1)
Subcellular
localization
TargetP
other 9  (predict for XP_013711532.2)
other 9  (predict for XP_048624242.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106415388
ath-u.5
for
SFR6
gma-u.5
for
100812938
gma-u.5
for
100793949
vvi-u.5
for
100265327
ppo-u.5
for
7490820
ppo-u.5
for
18102996
ppo-u.5
for
7477418
mtr-u.5
for
25493186
sly-u.5
for
101267765
osa-u.5
for
4349021
zma-u.5
for
100216950


Ortholog ID: 9557
Species bna bna bra ath ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC106415388 LOC106366873 LOC103839801 SFR6 LOC107925132 LOC107937762 LOC102610216 LOC100793949 LOC100812938 LOC100265327 LOC7490820 LOC7477418 LOC25493186 LOC101267765 LOC102600138 LOC107804334 LOC107761365 LOC4349021 LOC100216950 LOC123122861 LOC123181237 LOC123432911 LOC8065800 LOC100836267
Function* mediator of RNA polymerase II transcription subunit 16 mediator of RNA polymerase II transcription subunit 16-like mediator of RNA polymerase II transcription subunit 16 sensitive to freezing 6 mediator of RNA polymerase II transcription subunit 16 mediator of RNA polymerase II transcription subunit 16 mediator of RNA polymerase II transcription subunit 16 mediator of RNA polymerase II transcription subunit 16 mediator of RNA polymerase II transcription subunit 16 mediator of RNA polymerase II transcription subunit 16 mediator of RNA polymerase II transcription subunit 16 mediator of RNA polymerase II transcription subunit 16 mediator of RNA polymerase II transcription subunit 16 mediator of RNA polymerase II transcription subunit 16 mediator of RNA polymerase II transcription subunit 16 mediator of RNA polymerase II transcription subunit 16-like mediator of RNA polymerase II transcription subunit 16 mediator of RNA polymerase II transcription subunit 16 uncharacterized LOC100216950 mediator of RNA polymerase II transcription subunit 16 mediator of RNA polymerase II transcription subunit 16 mediator of RNA polymerase II transcription subunit 16 mediator of RNA polymerase II transcription subunit 16 mediator of RNA polymerase II transcription subunit 16
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 7
bna03013 Nucleocytoplasmic transport 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 7
bna03013 Nucleocytoplasmic transport 2
bna03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
ath03083 Polycomb repressive complex 2
ath03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
cit03018 RNA degradation 2
cit04136 Autophagy - other 2
cit03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
gma00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
sot04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 6
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 3
tae00310 Lysine degradation 3
tae03018 RNA degradation 2
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 3
tae03250 Viral life cycle - HIV-1 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106415388 106366873 103839801 825831 107925132 107937762 102610216 100793949 100812938 100265327 7490820 7477418 25493186 101267765 102600138 107804334 107761365 4349021 100216950 123122861 123181237 123432911 8065800 100836267
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