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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106416070   COP9 signalosome complex subunit 1 
 ath-u.5   FUS6   COP9 signalosome complex subunit 1 
 gma-u.5   100812958   COP9 signalosome complex subunit 1 
 gma-u.5   100782579   COP9 signalosome complex subunit 1 
 vvi-u.5   100250638   COP9 signalosome complex subunit 1 
 ppo-u.5   7494044   COP9 signalosome complex subunit 1 
 ppo-u.5   7464893   COP9 signalosome complex subunit 1 
 mtr-u.5   25502321   COP9 signalosome complex subunit 1 
 mtr-u.5   11435873   COP9 signalosome complex subunit 1 
 sly-u.5   101259078   COP9 signalosome complex subunit 1 
 osa-u.5   4331403   COP9 signalosome complex subunit 1 
 zma-u.5   100283343   uncharacterized LOC100283343 

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Top 50 coexpressed genes to 106416070 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106416070 (bna-r.1 coexpression data)

CoexMap"106416070"


bnaLOC106416070 | Entrez gene ID : 106416070    
Species bna ath gma vvi ppo mtr sly osa zma nta tae bdi sot bra sbi hvu cit cre ghi
Paralog 1 1 2 1 2 2 1 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0008180 [list] [network] COP9 signalosome  (36 genes)  IEA  
GO MF
Protein XP_013712360.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 1,  chlo 1,  mito 1,  plas 1,  pero 1,  chlo_mito 1,  cysk_nucl 1,  mito_plas 1  (predict for XP_013712360.2)
Subcellular
localization
TargetP
other 9  (predict for XP_013712360.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106416070

.
ath-u.5
for
FUS6

.
gma-u.5
for
100812958

.
gma-u.5
for
100782579

.
vvi-u.5
for
100250638

.
ppo-u.5
for
7494044

.
ppo-u.5
for
7464893

.
mtr-u.5
for
25502321

.
mtr-u.5
for
11435873

.
sly-u.5
for
101259078

.
osa-u.5
for
4331403

.
zma-u.5
for
100283343

.


Ortholog ID: 4936
Species ath gma gma sly osa zma bra vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sot cit cit bdi bdi nta nta
Symbol FUS6 LOC100812958 LOC100782579 LOC101259078 LOC4331403 LOC100283343 LOC103830283 LOC100250638 LOC7494044 LOC7464893 LOC11435873 LOC25502321 LOC123123990 LOC123181375 LOC123449922 LOC123434997 LOC107957264 LOC107911953 LOC106353259 LOC106452600 CHLRE_05g234300v5 LOC8077997 LOC102588514 LOC127901371 LOC102627033 LOC100837801 LOC100824022 LOC107788242 LOC107774179
Function* COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 uncharacterized LOC100283343 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1-like COP9 signalosome complex subunit 1-like COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 uncharacterized protein COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1-like COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1 COP9 signalosome complex subunit 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 4
gma03013 Nucleocytoplasmic transport 2
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 6
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 5
sly03013 Nucleocytoplasmic transport 3
sly03015 mRNA surveillance pathway 3
sly03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra03050 Proteasome 3
bra03013 Nucleocytoplasmic transport 3
bra03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 8
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 4
ppo00010 Glycolysis / Gluconeogenesis 3
ppo01200 Carbon metabolism 3
ppo01230 Biosynthesis of amino acids 2
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
mtr03040 Spliceosome 2
mtr03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae03040 Spliceosome 2
tae00280 Valine, leucine and isoleucine degradation 2
tae00410 beta-Alanine metabolism 2
tae00640 Propanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 3
tae03083 Polycomb repressive complex 3
tae03013 Nucleocytoplasmic transport 3
tae03015 mRNA surveillance pathway 2
tae00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 4
hvu03013 Nucleocytoplasmic transport 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04146 Peroxisome 2
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 4
bna03420 Nucleotide excision repair 4
bna03015 mRNA surveillance pathway 2
bna03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 4
bna03420 Nucleotide excision repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 12
cre04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03013 Nucleocytoplasmic transport 2
sbi03015 mRNA surveillance pathway 2
sbi03040 Spliceosome 2
sbi03083 Polycomb repressive complex 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit04142 Lysosome 2
cit00510 N-Glycan biosynthesis 2
cit03015 mRNA surveillance pathway 2
cit04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04141 Protein processing in endoplasmic reticulum 3
cit04142 Lysosome 2
cit00510 N-Glycan biosynthesis 2
cit03015 mRNA surveillance pathway 2
cit04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 4
bdi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 2
nta03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 3
nta03013 Nucleocytoplasmic transport 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 825286 100812958 100782579 101259078 4331403 100283343 103830283 100250638 7494044 7464893 11435873 25502321 123123990 123181375 123449922 123434997 107957264 107911953 106353259 106452600 5727726 8077997 102588514 127901371 102627033 100837801 100824022 107788242 107774179
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