ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	ROPGEF11	rop guanine nucleotide exchange factor-like protein
gma-u.5	100787455	rho guanine nucleotide exchange factor 8
gma-u.5	100778231	rho guanine nucleotide exchange factor 8
gma-u.5	100777496	rop guanine nucleotide exchange factor 12
vvi-u.5	100261758	rho guanine nucleotide exchange factor 8
vvi-u.5	100260990	rho guanine nucleotide exchange factor 8
mtr-u.5	25491404	rop guanine nucleotide exchange factor 12
mtr-u.5	11442005	rop guanine nucleotide exchange factor 12
sly-u.5	KPP	pollen-specific kinase partner protein
sly-u.5	101248400	rop guanine nucleotide exchange factor 12
sly-u.5	101251652	rop guanine nucleotide exchange factor 9
osa-u.5	4328986	rop guanine nucleotide exchange factor 10
osa-u.5	4339594	rop guanine nucleotide exchange factor 9
osa-u.5	4325619	rop guanine nucleotide exchange factor 11
zma-u.5	100274290	uncharacterized LOC100274290
zma-u.5	103626931	rop guanine nucleotide exchange factor 10
zma-u.5	100216854	uncharacterized LOC100216854

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

GO:0005085 [list] [network] guanyl-nucleotide exchange factor activity

(118 genes)

IEA

Protein

XP_048607048.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 3, nucl_plas 2, chlo 2, nucl 2, plas 1, cyto_E.R. 1

(predict for XP_048607048.1)

Subcellular
localization
TargetP

other 7

(predict for XP_048607048.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for ROPGEF11	gma-u.5 for 100787455	gma-u.5 for 100778231	gma-u.5 for 100777496	vvi-u.5 for 100261758	vvi-u.5 for 100260990	mtr-u.5 for 25491404	mtr-u.5 for 11442005	sly-u.5 for KPP	sly-u.5 for 101248400	sly-u.5 for 101251652	osa-u.5 for 4328986	osa-u.5 for 4339594	osa-u.5 for 4325619	zma-u.5 for 100274290	zma-u.5 for 103626931	zma-u.5 for 100216854

Ortholog

Ortholog ID: 905

Species

ath

ghi

cit

gma

vvi

mtr

sly

sot

nta

osa

zma

tae

bdi

Symbol

Function^*

RHO guanyl-nucleotide exchange factor 12

rop guanine nucleotide exchange factor 12

rho guanine nucleotide exchange factor 8

rop guanine nucleotide exchange factor 12

rop guanine nucleotide exchange factor 9

rop guanine nucleotide exchange factor 12

rop guanine nucleotide exchange factor 12-like

rho guanine nucleotide exchange factor 8-like

rop guanine nucleotide exchange factor 10

rop guanine nucleotide exchange factor 9

uncharacterized LOC100216854

rop guanine nucleotide exchange factor 9

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00910	Nitrogen metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00910	Nitrogen metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	2
gma00280	Valine, leucine and isoleucine degradation	2
gma00650	Butanoate metabolism	2
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	2
gma00280	Valine, leucine and isoleucine degradation	2
gma00650	Butanoate metabolism	2
gma04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00195	Photosynthesis	6
vvi00970	Aminoacyl-tRNA biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00040	Pentose and glucuronate interconversions	3
mtr00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04148	Efferocytosis	2
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	8
sot00941	Flavonoid biosynthesis	4
sot00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	4
sot00010	Glycolysis / Gluconeogenesis	3
sot00071	Fatty acid degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04626	Plant-pathogen interaction	2
zma04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00480	Glutathione metabolism	4
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03015	mRNA surveillance pathway	2

Expression

Expression pattern

Entrez Gene ID^*

844325

107952141

107949595

102616233

100777496

100812078

100260990

100261758

11442005

101251652

102600973

102584199

107820833

107778855

4328986

4325510

100216854

103651184

123065602

100829485

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to ROPGEF11 (ath-u.5 coexpression data)

Top 50 enrichment test to ROPGEF11 (ath-u.5 coexpression data)


Species	ath	gma	vvi	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	ppo	sbi	ghi	sot	nta	cre	tae
Paralog	1	3	2	2	3	3	3	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to ROPGEF11 (ath-u.5 coexpression data)

Top 50 enrichment test to ROPGEF11 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**