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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106420065   ribosome biogenesis protein BMS1 homolog 
 bna-r.1   106399607   ribosome biogenesis protein bms1-like 
 bna-r.1   106427066   ribosome biogenesis protein BMS1 homolog 
 bra-r.6   103843541   ribosome biogenesis protein BMS1 homolog 
 ath-u.5   AT1G06720   P-loop containing nucleoside triphosphate hydrolases superfamily protein 
 ghi-r.1   107885946   ribosome biogenesis protein BMS1 homolog 
 ghi-r.1   107915700   ribosome biogenesis protein BMS1 homolog 
 ghi-r.1   107896284   ribosome biogenesis protein BMS1 homolog 
 cit-r.1   102610796   uncharacterized LOC102610796 
 cit-r.1   102606875   ribosome biogenesis protein bms1-like 
 cit-r.1   102619249   uncharacterized LOC102619249 
 gma-u.5   100810906   ribosome biogenesis protein BMS1 homolog 
 gma-u.5   100792176   ribosome biogenesis protein BMS1 homolog 
 vvi-u.5   100253844   uncharacterized LOC100253844 
 ppo-u.5   18106821   uncharacterized LOC18106821 
 mtr-u.5   11407664   ribosome biogenesis protein BMS1 homolog 
 sly-u.5   101266977   uncharacterized LOC101266977 
 sot-r.1   102593009   ribosome biogenesis protein BMS1 homolog 
 nta-r.1   107788226   uncharacterized LOC107788226 
 nta-r.1   107777096   uncharacterized LOC107777096 
 osa-u.5   4332742   uncharacterized LOC4332742 
 zma-u.5   103634616   ribosome biogenesis protein BMS1 homolog 
 tae-r.2   123097557   ribosome biogenesis protein BMS1 homolog 
 tae-r.2   123085781   ribosome biogenesis protein BMS1 homolog 
 tae-r.2   123092222   ribosome biogenesis protein BMS1 homolog 
 hvu-r.1   123448716   ribosome biogenesis protein BMS1 homolog 
 sbi-r.1   8082348   ribosome biogenesis protein BMS1 homolog 
 bdi-r.1   100828930   ribosome biogenesis protein BMS1 homolog 
 cre-r.1   CHLRE_10g445600v5   uncharacterized protein 

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Top 50 coexpressed genes to 106420065 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106420065 (bna-r.1 coexpression data)

CoexMap"106420065"


bnaLOC106420065 | Entrez gene ID : 106420065    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 1 1 3 3 2 1 1 1 1 1 2 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03008 [list] [network] Ribosome biogenesis in eukaryotes (6477 genes)
GO BP
GO:0000479 [list] [network] endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (42 genes)  IEA  
GO:0000462 [list] [network] maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)  (142 genes)  IEA  
GO:0042254 [list] [network] ribosome biogenesis  (963 genes)  IEA  
GO CC
GO:0030686 [list] [network] 90S preribosome  (123 genes)  IEA  
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0034511 [list] [network] U3 snoRNA binding  (14 genes)  IEA  
GO:0003924 [list] [network] GTPase activity  (685 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (777 genes)  IEA  
Protein XP_022563695.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 4,  pero 1,  cysk 1  (predict for XP_022563695.1)
Subcellular
localization
TargetP
other 7,  chlo 5  (predict for XP_022563695.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106420065
bna-r.1
for
106399607
bna-r.1
for
106427066
bra-r.6
for
103843541
ath-u.5
for
AT1G06720
ghi-r.1
for
107885946
ghi-r.1
for
107915700
ghi-r.1
for
107896284
cit-r.1
for
102610796
cit-r.1
for
102606875
cit-r.1
for
102619249
gma-u.5
for
100810906
gma-u.5
for
100792176
vvi-u.5
for
100253844
ppo-u.5
for
18106821
mtr-u.5
for
11407664
sly-u.5
for
101266977
sot-r.1
for
102593009
nta-r.1
for
107788226
nta-r.1
for
107777096
osa-u.5
for
4332742
zma-u.5
for
103634616
tae-r.2
for
123097557
tae-r.2
for
123085781
tae-r.2
for
123092222
hvu-r.1
for
123448716
sbi-r.1
for
8082348
bdi-r.1
for
100828930
cre-r.1
for
CHLRE_10g445600v5


Ortholog ID: 7782
Species bna bna bna bra ath ghi ghi ghi cit cit cit gma gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC106420065 LOC106399607 LOC106427066 LOC103843541 AT1G06720 LOC107885946 LOC107915700 LOC107896284 LOC102610796 LOC102606875 LOC102619249 LOC100810906 LOC100792176 LOC100253844 LOC18106821 LOC11407664 LOC101266977 LOC102593009 LOC107788226 LOC107777096 LOC4332742 LOC103634616 LOC123097557 LOC123085781 LOC123092222 LOC123448716 LOC8082348 LOC100828930 CHLRE_10g445600v5
Function* ribosome biogenesis protein BMS1 homolog ribosome biogenesis protein bms1-like ribosome biogenesis protein BMS1 homolog ribosome biogenesis protein BMS1 homolog P-loop containing nucleoside triphosphate hydrolases superfamily protein ribosome biogenesis protein BMS1 homolog ribosome biogenesis protein BMS1 homolog ribosome biogenesis protein BMS1 homolog uncharacterized LOC102610796 ribosome biogenesis protein bms1-like uncharacterized LOC102619249 ribosome biogenesis protein BMS1 homolog ribosome biogenesis protein BMS1 homolog uncharacterized LOC100253844 uncharacterized LOC18106821 ribosome biogenesis protein BMS1 homolog uncharacterized LOC101266977 ribosome biogenesis protein BMS1 homolog uncharacterized LOC107788226 uncharacterized LOC107777096 uncharacterized LOC4332742 ribosome biogenesis protein BMS1 homolog ribosome biogenesis protein BMS1 homolog ribosome biogenesis protein BMS1 homolog ribosome biogenesis protein BMS1 homolog ribosome biogenesis protein BMS1 homolog ribosome biogenesis protein BMS1 homolog ribosome biogenesis protein BMS1 homolog uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 5
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03008 Ribosome biogenesis in eukaryotes 3
bna03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03430 Mismatch repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 7
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 5
ghi03018 RNA degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 5
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 6
cit03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03008 Ribosome biogenesis in eukaryotes 6
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03008 Ribosome biogenesis in eukaryotes 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 8
sot03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 7
tae03020 RNA polymerase 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 3
bdi03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03008 Ribosome biogenesis in eukaryotes 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106420065 106399607 106427066 103843541 837182 107885946 107915700 107896284 102610796 102606875 102619249 100810906 100792176 100253844 18106821 11407664 101266977 102593009 107788226 107777096 4332742 103634616 123097557 123085781 123092222 123448716 8082348 100828930 5723834
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