ATTED-II : GeneCoexpression result

Species	Gene	Description
ath-u.5	AT4G10890	DDE family endonuclease
gma-u.5	102665532	uncharacterized LOC102665532
vvi-u.5	104881368	uncharacterized LOC104881368
mtr-u.5	25502224	uncharacterized LOC25502224

functional annotation

KEGG

GO BP

GO:0006302 [list] [network] double-strand break repair

(365 genes)

IEA

GO CC

GO:0035861 [list] [network] site of double-strand break	(26 genes)	IEA
GO:0005634 [list] [network] nucleus	(9971 genes)	IEA

GO MF

Protein

XP_048596804.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, cyto 1, chlo 1, plas 1, cysk 1, cyto_pero 1, cysk_plas 1, cyto_E.R. 1

(predict for XP_048596804.1)

Subcellular
localization
TargetP

other 7, mito 5

(predict for XP_048596804.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-u.5 for AT4G10890	gma-u.5 for 102665532	vvi-u.5 for 104881368	mtr-u.5 for 25502224

Ortholog ID: 11702

Species

bra

ath

ghi

gma

vvi

mtr

sot

nta

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC103833918

DDE family endonuclease

uncharacterized LOC107910632

uncharacterized LOC107951100

uncharacterized LOC102665532

uncharacterized LOC104881368

uncharacterized LOC25502224

uncharacterized LOC102602573

uncharacterized LOC107813383

uncharacterized LOC107792351

uncharacterized LOC123103566

uncharacterized LOC123111791

uncharacterized LOC123395023

uncharacterized LOC110432243

uncharacterized LOC104584666

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00540	Lipopolysaccharide biosynthesis	2
ghi00510	N-Glycan biosynthesis	2
ghi00513	Various types of N-glycan biosynthesis	2
ghi00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00510	N-Glycan biosynthesis	2
ghi00513	Various types of N-glycan biosynthesis	2
ghi00563	Glycosylphosphatidylinositol (GPI)-anchor biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03030	DNA replication	7
gma03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00230	Purine metabolism	4
mtr00240	Pyrimidine metabolism	4
mtr00480	Glutathione metabolism	4
mtr01232	Nucleotide metabolism	4
mtr03030	DNA replication	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04075	Plant hormone signal transduction	4
sot03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03440	Homologous recombination	12
tae03460	Fanconi anemia pathway	6
tae03030	DNA replication	6
tae03410	Base excision repair	2
tae03420	Nucleotide excision repair	2

Expression

Expression pattern

Entrez Gene ID^*

103833918

826688

107910632

107951100

102665532

104881368

25502224

102602573

107813383

107792351

123103566

123111791

123395023

110432243

104584666

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT4G10890 (ath-u.5 coexpression data)

Top 50 enrichment test to AT4G10890 (ath-u.5 coexpression data)


Species	ath	gma	vvi	mtr	hvu	zma	bna	sly	cit	bra	ghi	osa	ppo	sbi	bdi	nta	tae	cre	sot
Paralog	1	1	1	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT4G10890 (ath-u.5 coexpression data)

Top 50 enrichment test to AT4G10890 (ath-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**