ATTED-II : GeneCoexpression result

Species	Gene	Description
bna-r.1	BNAA02G17360D	uncharacterized BNAA02G17360D
bna-r.1	106390980	uncharacterized LOC106390980
bra-r.6	103852969	uncharacterized LOC103852969
ath-u.5	AT1G75670	DNA-directed RNA polymerase
ghi-r.1	107951050	uncharacterized LOC107951050
ghi-r.1	107888576	uncharacterized LOC107888576
ghi-r.1	107910711	uncharacterized LOC107910711
cit-r.1	102620892	uncharacterized LOC102620892
gma-u.5	100816727	uncharacterized LOC100816727
gma-u.5	100527229	uncharacterized LOC100527229
vvi-u.5	100264366	uncharacterized LOC100264366
ppo-u.5	7493952	uncharacterized LOC7493952
ppo-u.5	7490660	DNA-directed RNA polymerase I subunit rpa43
mtr-u.5	11436168	DNA-directed RNA polymerase I subunit rpa43
sly-u.5	101248579	uncharacterized LOC101248579
sot-r.1	102591771	uncharacterized LOC102591771
nta-r.1	107801865	uncharacterized LOC107801865
nta-r.1	107798310	uncharacterized LOC107798310
osa-u.5	4340256	DNA-directed RNA polymerase I subunit rpa43
osa-u.5	4352407	DNA-directed RNA polymerase I subunit rpa43
zma-u.5	100276818	uncharacterized LOC100276818
tae-r.2	123111630	uncharacterized LOC123111630
tae-r.2	123103431	uncharacterized LOC123103431
tae-r.2	123121053	uncharacterized LOC123121053
hvu-r.1	123397765	uncharacterized LOC123397765
sbi-r.1	8064632	uncharacterized LOC8064632
bdi-r.1	100831354	DNA-directed RNA polymerase I subunit rpa43
cre-r.1	CHLRE_02g086750v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO:0006352 [list] [network] DNA-templated transcription initiation

(224 genes)

IEA

GO CC

GO:0005736 [list] [network] RNA polymerase I complex

(52 genes)

IEA

GO MF

Protein

XP_013718646.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, E.R. 1, E.R._vacu 1, chlo 1, nucl 1

(predict for XP_013718646.1)

Subcellular
localization
TargetP

other 8

(predict for XP_013718646.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for BNAA02G17360D	bna-r.1 for 106390980	bra-r.6 for 103852969	ath-u.5 for AT1G75670	ghi-r.1 for 107951050	ghi-r.1 for 107888576	ghi-r.1 for 107910711	cit-r.1 for 102620892	gma-u.5 for 100816727	gma-u.5 for 100527229	vvi-u.5 for 100264366	ppo-u.5 for 7493952	ppo-u.5 for 7490660	mtr-u.5 for 11436168	sly-u.5 for 101248579	sot-r.1 for 102591771	nta-r.1 for 107801865	nta-r.1 for 107798310	osa-u.5 for 4340256	osa-u.5 for 4352407	zma-u.5 for 100276818	tae-r.2 for 123111630	tae-r.2 for 123103431	tae-r.2 for 123121053	hvu-r.1 for 123397765	sbi-r.1 for 8064632	bdi-r.1 for 100831354	cre-r.1 for CHLRE_02g086750v5

Ortholog

Ortholog ID: 7857

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

uncharacterized BNAA02G17360D

uncharacterized LOC106390980

uncharacterized LOC103852969

DNA-directed RNA polymerase

uncharacterized LOC107910711

uncharacterized LOC107955495

uncharacterized LOC107955492

uncharacterized LOC102620892

uncharacterized LOC100816727

uncharacterized LOC100527229

uncharacterized LOC100264366

uncharacterized LOC7493952

DNA-directed RNA polymerase I subunit rpa43

uncharacterized LOC101248579

uncharacterized LOC102591771

uncharacterized LOC107801865

uncharacterized LOC107798310

DNA-directed RNA polymerase I subunit rpa43

uncharacterized LOC100276818

uncharacterized LOC123111630

uncharacterized LOC123103431

uncharacterized LOC123121053

uncharacterized LOC123397765

uncharacterized LOC8064632

DNA-directed RNA polymerase I subunit rpa43

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	4
ath03020	RNA polymerase	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03022	Basal transcription factors	3
gma03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	8
vvi00230	Purine metabolism	3
vvi01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03008	Ribosome biogenesis in eukaryotes	3
osa03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	8
tae03018	RNA degradation	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	4
hvu03013	Nucleocytoplasmic transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03010	Ribosome	11

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03020	RNA polymerase	2
cre03008	Ribosome biogenesis in eukaryotes	2

Expression

Expression pattern

Entrez Gene ID^*

106422393

106390980

103852969

843901

107910711

107955495

107955492

102620892

100816727

100527229

100264366

7493952

7490660

11436168

101248579

102591771

107801865

107798310

4340256

4352407

100276818

123111630

123103431

123121053

123397765

8064632

100831354

5727406

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to BNAA02G17360D (bna-r.1 coexpression data)

Top 50 enrichment test to BNAA02G17360D (bna-r.1 coexpression data)


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	1	1	3	1	2	1	2	1	1	1	2	2	1	3	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to BNAA02G17360D (bna-r.1 coexpression data)

Top 50 enrichment test to BNAA02G17360D (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**