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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   COL5   CONSTANS-like 5 
 ath-u.5   COL3   CONSTANS-like 3 
 gma-u.5   COL2B   zinc finger protein CONSTANS-LIKE 2 
 gma-u.5   COL2a   CONSTANS-like 2a 
 vvi-u.5   100246796   zinc finger protein CONSTANS-LIKE 4 
 vvi-u.5   100248114   zinc finger protein CONSTANS-LIKE 2 
 vvi-u.5   100244502   zinc finger protein CONSTANS-LIKE 5 
 ppo-u.5   7468389   zinc finger protein CONSTANS-LIKE 2 
 ppo-u.5   7465448   zinc finger protein CONSTANS-LIKE 4 
 ppo-u.5   18107444   zinc finger protein CONSTANS-LIKE 2 
 mtr-u.5   11425462   zinc finger protein CONSTANS-LIKE 5 
 mtr-u.5   25497637   zinc finger protein CONSTANS-LIKE 2 
 mtr-u.5   11431452   zinc finger protein CONSTANS-LIKE 4 
 sly-u.5   101254368   zinc finger protein CONSTANS-LIKE 4 
 sly-u.5   100191137   CONSTANS-like protein 
 sly-u.5   101246004   CONSTANS 2 
 osa-u.5   4336288   zinc finger protein CONSTANS-LIKE 3 
 osa-u.5   4346474   zinc finger protein CO3-like 
 osa-u.5   4329950   zinc finger protein CONSTANS-LIKE 3 
 zma-u.5   100281289   Col3 
 zma-u.5   100147736   uncharacterized LOC100147736 
 zma-u.5   103646270   zinc finger protein CONSTANS-LIKE 3 

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Top 50 coexpressed genes to COL5 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to COL5 (ath-u.5 coexpression data)

CoexMap"106424669"


bnaLOC106424669 | Entrez gene ID : 106424669    
Species ath gma vvi ppo mtr sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta bna
Paralog 2 2 3 3 3 3 3 3 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna04712 [list] [network] Circadian rhythm - plant (144 genes)
GO BP
GO:0009909 [list] [network] regulation of flower development  (99 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0008270 [list] [network] zinc ion binding  (3493 genes)  IEA  
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_013720877.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1  (predict for XP_013720877.1)
Subcellular
localization
TargetP
other 7  (predict for XP_013720877.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
COL5

.
ath-u.5
for
COL3

.
gma-u.5
for
COL2B

.
gma-u.5
for
COL2a

.
vvi-u.5
for
100246796

.
vvi-u.5
for
100248114

.
vvi-u.5
for
100244502

.
ppo-u.5
for
7468389

.
ppo-u.5
for
7465448

.
ppo-u.5
for
18107444

.
mtr-u.5
for
11425462

.
mtr-u.5
for
25497637

.
mtr-u.5
for
11431452

.
sly-u.5
for
101254368

.
sly-u.5
for
100191137

.
sly-u.5
for
101246004

.
osa-u.5
for
4336288

.
osa-u.5
for
4346474

.
osa-u.5
for
4329950

.
zma-u.5
for
100281289

.
zma-u.5
for
100147736

.
zma-u.5
for
103646270

.


Ortholog ID: 543
Species ath ath gma sly sly osa osa zma zma bra vvi vvi ppo ppo mtr mtr tae ghi ghi cre cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol COL5 COL2 COL8 CO1 LOC101246004 LOC4340746 LOC4346474 LOC100147736 LOC103646270 LOC103851008 LOC100246796 LOC100244502 LOC18107444 LOC7489120 LOC11431452 LOC25497637 LOC123045911 LOC107945774 LOC107931695 CHLRE_06g278159v5 CHLRE_12g534100v5 LOC8059668 LOC8060206 CO LOC102582832 LOC102620807 LOC102610606 LOC100821263 LOC100825107 LOC107799876 LOC107814243
Function* CONSTANS-like 5 CONSTANS-like 2 zinc finger protein CONSTANS-LIKE 5-like CONSTANS 1 CONSTANS 2 zinc finger protein HD1-like zinc finger protein CO3-like uncharacterized LOC100147736 zinc finger protein CONSTANS-LIKE 3 zinc finger protein CONSTANS-LIKE 1 zinc finger protein CONSTANS-LIKE 4 zinc finger protein CONSTANS-LIKE 5 zinc finger protein CONSTANS-LIKE 2 zinc finger protein CONSTANS-LIKE 5 zinc finger protein CONSTANS-LIKE 4 zinc finger protein CONSTANS-LIKE 2 zinc finger protein CONSTANS-LIKE 4 zinc finger protein CONSTANS-LIKE 2 zinc finger protein CONSTANS-LIKE 5 uncharacterized protein uncharacterized protein zinc finger protein CONSTANS-LIKE 3 zinc finger protein CONSTANS-LIKE 4 CONSTANS zinc finger protein CONSTANS-LIKE 5-like zinc finger protein CONSTANS-LIKE 5 zinc finger protein CONSTANS-LIKE 4 zinc finger protein CONSTANS-LIKE 3 zinc finger protein HD1 zinc finger protein CONSTANS-LIKE 3-like zinc finger protein CONSTANS-LIKE 3-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 2
sly00196 Photosynthesis - antenna proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00330 Arginine and proline metabolism 2
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00196 Photosynthesis - antenna proteins 4
mtr04712 Circadian rhythm - plant 3
mtr00630 Glyoxylate and dicarboxylate metabolism 2
mtr01200 Carbon metabolism 2
mtr04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 2
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00195 Photosynthesis 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835872 821298 100805693 778253 101246004 4340746 4346474 100147736 103646270 103851008 100246796 100244502 18107444 7489120 11431452 25497637 123045911 107945774 107931695 5723575 66055662 8059668 8060206 102577671 102582832 102620807 102610606 100821263 100825107 107799876 107814243
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