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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106425470   peroxiredoxin-2E, chloroplastic-like 
 bna-r.1   125591993   peroxiredoxin-2E, chloroplastic-like 
 bna-r.1   106385780   peroxiredoxin-2E, chloroplastic 
 bna-r.1   106367921   peroxiredoxin-2E, chloroplastic 
 bra-r.6   103872156   peroxiredoxin-2E, chloroplastic 
 bra-r.6   103842281   peroxiredoxin-2E, chloroplastic 
 ath-u.5   AT3G52960   Thioredoxin superfamily protein 
 ghi-r.1   121214030   peroxiredoxin-2E, chloroplastic 
 ghi-r.1   107905354   peroxiredoxin-2E, chloroplastic 
 cit-r.1   102616506   peroxiredoxin-2E, chloroplastic 
 gma-u.5   100783307   peroxiredoxin-2E, chloroplastic 
 vvi-u.5   100264932   type II peroxiredoxin E 
 ppo-u.5   18104326   peroxiredoxin-2E, chloroplastic 
 mtr-u.5   25499388   peroxiredoxin-2E, chloroplastic 
 sly-u.5   104644379   peroxiredoxin-2E-2, chloroplastic 
 sot-r.1   102596276   peroxiredoxin-2E-2, chloroplastic-like 
 sot-r.1   102596361   peroxiredoxin-2E-2, chloroplastic-like 
 nta-r.1   107826335   peroxiredoxin-2B-like 
 nta-r.1   107823523   peroxiredoxin-2E-2, chloroplastic-like 
 nta-r.1   107806837   peroxiredoxin-2B 
 osa-u.5   4328586   peroxiredoxin-2E-2, chloroplastic-like 
 osa-u.5   4341570   peroxiredoxin-2E-1, chloroplastic-like 
 zma-u.5   100282052   uncharacterized LOC100282052 
 tae-r.2   123148378   peroxiredoxin-2E-1, chloroplastic 
 tae-r.2   123136781   peroxiredoxin-2E-2, chloroplastic 
 tae-r.2   123144269   peroxiredoxin-2E-2, chloroplastic 
 hvu-r.1   123403884   peroxiredoxin-2E-2, chloroplastic-like 
 hvu-r.1   123411553   peroxiredoxin-2E-1, chloroplastic-like 
 sbi-r.1   8079458   peroxiredoxin-2E-2, chloroplastic 
 sbi-r.1   8083478   peroxiredoxin-2E-1, chloroplastic 
 bdi-r.1   100845975   peroxiredoxin-2E-1, chloroplastic 
 bdi-r.1   100844889   peroxiredoxin-2E-2, chloroplastic 
 cre-r.1   CHLRE_01g014350v5   uncharacterized protein 

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Top 50 coexpressed genes to 106425470 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106425470 (bna-r.1 coexpression data)

CoexMap"106425470"


bnaLOC106425470 | Entrez gene ID : 106425470    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 1 2 1 1 1 1 1 1 2 3 2 1 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045454 [list] [network] cell redox homeostasis  (68 genes)  IEA  
GO:0034599 [list] [network] cellular response to oxidative stress  (129 genes)  IEA  
GO:0042744 [list] [network] hydrogen peroxide catabolic process  (295 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (16489 genes)  IEA  
GO MF
GO:0008379 [list] [network] thioredoxin peroxidase activity  (25 genes)  IEA  
Protein XP_013721658.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for XP_013721658.2)
Subcellular
localization
TargetP
chlo 9  (predict for XP_013721658.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106425470
bna-r.1
for
125591993
bna-r.1
for
106385780
bna-r.1
for
106367921
bra-r.6
for
103872156
bra-r.6
for
103842281
ath-u.5
for
AT3G52960
ghi-r.1
for
121214030
ghi-r.1
for
107905354
cit-r.1
for
102616506
gma-u.5
for
100783307
vvi-u.5
for
100264932
ppo-u.5
for
18104326
mtr-u.5
for
25499388
sly-u.5
for
104644379
sot-r.1
for
102596276
sot-r.1
for
102596361
nta-r.1
for
107826335
nta-r.1
for
107823523
nta-r.1
for
107806837
osa-u.5
for
4328586
osa-u.5
for
4341570
zma-u.5
for
100282052
tae-r.2
for
123148378
tae-r.2
for
123136781
tae-r.2
for
123144269
hvu-r.1
for
123403884
hvu-r.1
for
123411553
sbi-r.1
for
8079458
sbi-r.1
for
8083478
bdi-r.1
for
100845975
bdi-r.1
for
100844889
cre-r.1
for
CHLRE_01g014350v5


Ortholog ID: 5127
Species bna bna bna bra bra ath ghi ghi cit gma vvi ppo mtr sly sot sot nta nta nta osa osa zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC106425470 LOC106385780 LOC106363452 LOC103872156 LOC103842281 AT3G52960 LOC121214030 LOC107905354 LOC102616506 LOC100783307 LOC100264932 LOC18104326 LOC25499388 LOC104644379 LOC102596276 LOC102596361 LOC107826335 LOC107823523 LOC107806837 LOC4328586 LOC4341570 LOC100282052 LOC123136781 LOC123144269 LOC123166769 LOC123403884 LOC123411553 LOC8079458 LOC8083478 LOC100845975 LOC100844889 CHLRE_01g014350v5
Function* peroxiredoxin-2E, chloroplastic-like peroxiredoxin-2E, chloroplastic peroxiredoxin-2E, chloroplastic-like peroxiredoxin-2E, chloroplastic peroxiredoxin-2E, chloroplastic Thioredoxin superfamily protein peroxiredoxin-2E, chloroplastic peroxiredoxin-2E, chloroplastic peroxiredoxin-2E, chloroplastic peroxiredoxin-2E, chloroplastic type II peroxiredoxin E peroxiredoxin-2E, chloroplastic peroxiredoxin-2E, chloroplastic peroxiredoxin-2E-2, chloroplastic peroxiredoxin-2E-2, chloroplastic-like peroxiredoxin-2E-2, chloroplastic-like peroxiredoxin-2B-like peroxiredoxin-2E-2, chloroplastic-like peroxiredoxin-2B peroxiredoxin-2E-2, chloroplastic-like peroxiredoxin-2E-1, chloroplastic-like uncharacterized LOC100282052 peroxiredoxin-2E-2, chloroplastic peroxiredoxin-2E-2, chloroplastic peroxiredoxin-2E-1, chloroplastic peroxiredoxin-2E-2, chloroplastic-like peroxiredoxin-2E-1, chloroplastic-like peroxiredoxin-2E-2, chloroplastic peroxiredoxin-2E-1, chloroplastic peroxiredoxin-2E-1, chloroplastic peroxiredoxin-2E-2, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01200 Carbon metabolism 8
bra00710 Carbon fixation by Calvin cycle 5
bra01230 Biosynthesis of amino acids 5
bra00010 Glycolysis / Gluconeogenesis 4
bra00030 Pentose phosphate pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01210 2-Oxocarboxylic acid metabolism 4
ath00620 Pyruvate metabolism 3
ath01200 Carbon metabolism 3
ath00061 Fatty acid biosynthesis 3
ath01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 5
ghi00240 Pyrimidine metabolism 3
ghi01232 Nucleotide metabolism 3
ghi01200 Carbon metabolism 3
ghi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 8
cit01230 Biosynthesis of amino acids 3
cit01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma01200 Carbon metabolism 3
gma01230 Biosynthesis of amino acids 2
gma01240 Biosynthesis of cofactors 2
gma00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 7
mtr01200 Carbon metabolism 5
mtr00710 Carbon fixation by Calvin cycle 3
mtr01210 2-Oxocarboxylic acid metabolism 3
mtr00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 7
sot00010 Glycolysis / Gluconeogenesis 6
sot01230 Biosynthesis of amino acids 6
sot01240 Biosynthesis of cofactors 3
sot00620 Pyruvate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01240 Biosynthesis of cofactors 5
sot00061 Fatty acid biosynthesis 3
sot01212 Fatty acid metabolism 3
sot00740 Riboflavin metabolism 2
sot00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01200 Carbon metabolism 5
osa01230 Biosynthesis of amino acids 3
osa00785 Lipoic acid metabolism 3
osa01240 Biosynthesis of cofactors 3
osa00260 Glycine, serine and threonine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 7
osa00010 Glycolysis / Gluconeogenesis 2
osa00710 Carbon fixation by Calvin cycle 2
osa01200 Carbon metabolism 2
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 2
zma03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 6
tae00195 Photosynthesis 6
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 10
tae00190 Oxidative phosphorylation 3
tae00195 Photosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 3
tae04016 MAPK signaling pathway - plant 2
tae04075 Plant hormone signal transduction 2
tae00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 3
hvu01200 Carbon metabolism 2
hvu00261 Monobactam biosynthesis 2
hvu00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
sbi00190 Oxidative phosphorylation 2
sbi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 4
bdi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 5
bdi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106425470 106385780 106363452 103872156 103842281 824462 121214030 107905354 102616506 100783307 100264932 18104326 25499388 104644379 102596276 102596361 107826335 107823523 107806837 4328586 4341570 100282052 123136781 123144269 123166769 123403884 123411553 8079458 8083478 100845975 100844889 5715086
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