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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106426392   ubiquitin C-terminal hydrolase 12 
 bna-r.1   125581490   ubiquitin C-terminal hydrolase 12-like 
 bna-r.1   106375472   ubiquitin C-terminal hydrolase 12-like 
 bna-r.1   106351307   ubiquitin C-terminal hydrolase 13-like 
 bra-r.6   103870300   ubiquitin carboxyl-terminal hydrolase 13 
 bra-r.6   103855679   ubiquitin carboxyl-terminal hydrolase 12 
 bra-r.6   103859415   ubiquitin carboxyl-terminal hydrolase 13 
 ath-u.5   UBP13   ubiquitin-specific protease 13 
 ath-u.5   UBP12   ubiquitin-specific protease 12 
 ghi-r.1   107906657   ubiquitin C-terminal hydrolase 13 
 ghi-r.1   107925641   ubiquitin C-terminal hydrolase 12 
 ghi-r.1   107941977   ubiquitin C-terminal hydrolase 13 
 cit-r.1   102619605   ubiquitin C-terminal hydrolase 12 
 cit-r.1   102619247   ubiquitin C-terminal hydrolase 13-like 
 gma-u.5   100778442   ubiquitin C-terminal hydrolase 12 
 gma-u.5   100800328   ubiquitin C-terminal hydrolase 12 
 gma-u.5   100337655   ubiquitin specific protease 12 
 vvi-u.5   100266796   ubiquitin C-terminal hydrolase 12 
 vvi-u.5   100252573   ubiquitin C-terminal hydrolase 12 
 vvi-u.5   100244518   ubiquitin C-terminal hydrolase 12 
 ppo-u.5   7469919   ubiquitin C-terminal hydrolase 12 
 ppo-u.5   7491593   ubiquitin C-terminal hydrolase 12 
 ppo-u.5   7486860   ubiquitin C-terminal hydrolase 12 
 mtr-u.5   11418867   ubiquitin carboxyl-terminal hydrolase 12 
 mtr-u.5   11432874   ubiquitin carboxyl-terminal hydrolase 13 
 mtr-u.5   11443023   ubiquitin carboxyl-terminal hydrolase 13 
 sly-u.5   101266987   ubiquitin C-terminal hydrolase 12 
 sly-u.5   101248777   ubiquitin C-terminal hydrolase 12-like 
 sly-u.5   101257631   ubiquitin C-terminal hydrolase 13-like 
 sot-r.1   102598288   ubiquitin carboxyl-terminal hydrolase 12-like 
 sot-r.1   102587040   ubiquitin carboxyl-terminal hydrolase 12-like 
 sot-r.1   102593182   ubiquitin carboxyl-terminal hydrolase 12 
 nta-r.1   107760236   ubiquitin C-terminal hydrolase 12 
 nta-r.1   107760390   ubiquitin C-terminal hydrolase 12 
 nta-r.1   107769508   ubiquitin C-terminal hydrolase 12 
 osa-u.5   4342469   ubiquitin C-terminal hydrolase 12 
 osa-u.5   4352242   ubiquitin C-terminal hydrolase 12 
 osa-u.5   4324616   ubiquitin C-terminal hydrolase 13 
 zma-u.5   100383306   ubiquitin carboxyl-terminal hydrolase 12 
 zma-u.5   100383827   Ubiquitin carboxyl-terminal hydrolase 13 
 zma-u.5   100194235   uncharacterized LOC100194235 
 tae-r.2   123062197   ubiquitin C-terminal hydrolase 13 
 tae-r.2   123052820   ubiquitin C-terminal hydrolase 12 
 tae-r.2   123044942   ubiquitin C-terminal hydrolase 12 
 hvu-r.1   123448450   ubiquitin C-terminal hydrolase 12-like 
 hvu-r.1   123444525   ubiquitin C-terminal hydrolase 13-like 
 hvu-r.1   123426209   ubiquitin C-terminal hydrolase 12-like 
 sbi-r.1   8079273   ubiquitin carboxyl-terminal hydrolase 13 
 sbi-r.1   8071953   ubiquitin carboxyl-terminal hydrolase 12 
 sbi-r.1   8063275   ubiquitin carboxyl-terminal hydrolase 12 
 bdi-r.1   100834129   ubiquitin carboxyl-terminal hydrolase 12 
 bdi-r.1   100843772   ubiquitin carboxyl-terminal hydrolase 13 
 bdi-r.1   100832490   ubiquitin carboxyl-terminal hydrolase 12 
 cre-r.1   CHLRE_07g336200v5   uncharacterized protein 

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Top 50 coexpressed genes to 106426392 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106426392 (bna-r.1 coexpression data)

CoexMap"106426392"


bnaLOC106426392 | Entrez gene ID : 106426392    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 2 3 2 3 3 3 3 3 3 3 3 3 3 3 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03083 [list] [network] Polycomb repressive complex (189 genes)
GO BP
GO:0031647 [list] [network] regulation of protein stability  (66 genes)  IEA  
GO:0016579 [list] [network] protein deubiquitination  (243 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (3196 genes)  IEA  
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0004843 [list] [network] cysteine-type deubiquitinase activity  (192 genes)  IEA  
GO:0004197 [list] [network] cysteine-type endopeptidase activity  (255 genes)  IEA  
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_048607779.1 [sequence] [blastp]
XP_048607780.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  nucl 4  (predict for XP_048607779.1)
cyto 7,  nucl 3  (predict for XP_048607780.1)
Subcellular
localization
TargetP
other 8  (predict for XP_048607779.1)
other 8  (predict for XP_048607780.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106426392
bna-r.1
for
125581490
bna-r.1
for
106375472
bna-r.1
for
106351307
bra-r.6
for
103870300
bra-r.6
for
103855679
bra-r.6
for
103859415
ath-u.5
for
UBP13
ath-u.5
for
UBP12
ghi-r.1
for
107906657
ghi-r.1
for
107925641
ghi-r.1
for
107941977
cit-r.1
for
102619605
cit-r.1
for
102619247
gma-u.5
for
100778442
gma-u.5
for
100800328
gma-u.5
for
100337655
vvi-u.5
for
100266796
vvi-u.5
for
100252573
vvi-u.5
for
100244518
ppo-u.5
for
7469919
ppo-u.5
for
7491593
ppo-u.5
for
7486860
mtr-u.5
for
11418867
mtr-u.5
for
11432874
mtr-u.5
for
11443023
sly-u.5
for
101266987
sly-u.5
for
101248777
sly-u.5
for
101257631
sot-r.1
for
102598288
sot-r.1
for
102587040
sot-r.1
for
102593182
nta-r.1
for
107760236
nta-r.1
for
107760390
nta-r.1
for
107769508
osa-u.5
for
4342469
osa-u.5
for
4352242
osa-u.5
for
4324616
zma-u.5
for
100383306
zma-u.5
for
100383827
zma-u.5
for
100194235
tae-r.2
for
123062197
tae-r.2
for
123052820
tae-r.2
for
123044942
hvu-r.1
for
123448450
hvu-r.1
for
123444525
hvu-r.1
for
123426209
sbi-r.1
for
8079273
sbi-r.1
for
8071953
sbi-r.1
for
8063275
bdi-r.1
for
100834129
bdi-r.1
for
100843772
bdi-r.1
for
100832490
cre-r.1
for
CHLRE_07g336200v5


Ortholog ID: 900
Species bna bna bna bra bra bra ath ath ghi ghi ghi cit cit gma gma gma vvi vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi cre
Symbol LOC106426392 LOC106375472 LOC106452507 LOC103855679 LOC103845922 LOC103847000 UBP13 UBP12 LOC107941977 LOC121214020 LOC107899198 LOC102619605 LOC102619247 LOC100778442 LOC100800328 LOC100810922 LOC100266796 LOC100252573 LOC100244518 LOC7469919 LOC7491593 LOC7455616 LOC11418867 LOC11432874 LOC11443023 LOC101266987 LOC101248777 LOC101265553 LOC102598288 LOC102593182 LOC102602101 LOC107760390 LOC107830540 LOC107804674 LOC4342469 LOC4324616 LOC9270404 LOC100383306 LOC100383827 LOC100381748 LOC123052820 LOC123110922 LOC123102741 LOC123448450 LOC123444525 LOC123395413 LOC8079273 LOC8071953 LOC8063275 LOC100834129 LOC100832490 LOC100831891 CHLRE_07g336200v5
Function* ubiquitin C-terminal hydrolase 12 ubiquitin C-terminal hydrolase 12-like ubiquitin C-terminal hydrolase 13 ubiquitin carboxyl-terminal hydrolase 12 ubiquitin carboxyl-terminal hydrolase 13 ubiquitin carboxyl-terminal hydrolase 12 ubiquitin-specific protease 13 ubiquitin-specific protease 12 ubiquitin C-terminal hydrolase 13 ubiquitin C-terminal hydrolase 12 ubiquitin C-terminal hydrolase 12 ubiquitin C-terminal hydrolase 12 ubiquitin C-terminal hydrolase 13-like ubiquitin C-terminal hydrolase 12 ubiquitin C-terminal hydrolase 12 ubiquitin C-terminal hydrolase 12 ubiquitin C-terminal hydrolase 12 ubiquitin C-terminal hydrolase 12 ubiquitin C-terminal hydrolase 12 ubiquitin C-terminal hydrolase 12 ubiquitin C-terminal hydrolase 12 ubiquitin C-terminal hydrolase 12 ubiquitin carboxyl-terminal hydrolase 12 ubiquitin carboxyl-terminal hydrolase 13 ubiquitin carboxyl-terminal hydrolase 13 ubiquitin C-terminal hydrolase 12 ubiquitin C-terminal hydrolase 12-like ubiquitin C-terminal hydrolase 13-like ubiquitin carboxyl-terminal hydrolase 12-like ubiquitin carboxyl-terminal hydrolase 12 ubiquitin carboxyl-terminal hydrolase 13-like ubiquitin C-terminal hydrolase 12 ubiquitin C-terminal hydrolase 12-like ubiquitin C-terminal hydrolase 12 ubiquitin C-terminal hydrolase 12 ubiquitin C-terminal hydrolase 13 ubiquitin C-terminal hydrolase 12 ubiquitin carboxyl-terminal hydrolase 12 Ubiquitin carboxyl-terminal hydrolase 13 Ubiquitin carboxyl-terminal hydrolase 13 ubiquitin C-terminal hydrolase 12 ubiquitin C-terminal hydrolase 12 ubiquitin C-terminal hydrolase 12 ubiquitin C-terminal hydrolase 12-like ubiquitin C-terminal hydrolase 13-like ubiquitin C-terminal hydrolase 12-like ubiquitin carboxyl-terminal hydrolase 13 ubiquitin carboxyl-terminal hydrolase 12 ubiquitin carboxyl-terminal hydrolase 12 ubiquitin carboxyl-terminal hydrolase 12 ubiquitin carboxyl-terminal hydrolase 12 ubiquitin carboxyl-terminal hydrolase 12 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 6
bna04144 Endocytosis 2
bna04120 Ubiquitin mediated proteolysis 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra04144 Endocytosis 2
bra05100 Bacterial invasion of epithelial cells 2
bra03083 Polycomb repressive complex 2
bra03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03083 Polycomb repressive complex 3
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
ath03083 Polycomb repressive complex 2
ath04141 Protein processing in endoplasmic reticulum 2
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 3
ath04141 Protein processing in endoplasmic reticulum 3
ath03083 Polycomb repressive complex 2
ath03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 2
cit03083 Polycomb repressive complex 2
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 4
gma03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 4
gma05100 Bacterial invasion of epithelial cells 4
gma03083 Polycomb repressive complex 4
gma04142 Lysosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03083 Polycomb repressive complex 4
gma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
vvi03083 Polycomb repressive complex 2
vvi03040 Spliceosome 2
vvi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 4
vvi04141 Protein processing in endoplasmic reticulum 2
vvi03083 Polycomb repressive complex 2
vvi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 4
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03083 Polycomb repressive complex 3
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03083 Polycomb repressive complex 3
mtr03015 mRNA surveillance pathway 2
mtr04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03082 ATP-dependent chromatin remodeling 2
sly04120 Ubiquitin mediated proteolysis 2
sly03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03083 Polycomb repressive complex 4
sly04120 Ubiquitin mediated proteolysis 3
sly04141 Protein processing in endoplasmic reticulum 3
sly03420 Nucleotide excision repair 2
sly00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 5
sot04144 Endocytosis 3
sot03083 Polycomb repressive complex 2
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03083 Polycomb repressive complex 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 2
sot03083 Polycomb repressive complex 2
sot04142 Lysosome 2
sot04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 3
nta03083 Polycomb repressive complex 2
nta00073 Cutin, suberine and wax biosynthesis 2
nta00561 Glycerolipid metabolism 2
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 3
nta03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03083 Polycomb repressive complex 3
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 4
osa03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03083 Polycomb repressive complex 5
osa03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03083 Polycomb repressive complex 4
zma04144 Endocytosis 3
zma03040 Spliceosome 3
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03083 Polycomb repressive complex 6
zma03018 RNA degradation 2
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03018 RNA degradation 2
zma03040 Spliceosome 2
zma03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 6
tae04141 Protein processing in endoplasmic reticulum 3
tae00561 Glycerolipid metabolism 3
tae00564 Glycerophospholipid metabolism 3
tae04070 Phosphatidylinositol signaling system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 9
tae04142 Lysosome 8
tae05100 Bacterial invasion of epithelial cells 6
tae03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04148 Efferocytosis 4
tae03083 Polycomb repressive complex 3
tae00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 3
hvu03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi03083 Polycomb repressive complex 2
sbi03015 mRNA surveillance pathway 2
sbi04142 Lysosome 2
sbi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106426392 106375472 106452507 103855679 103845922 103847000 820364 830548 107941977 121214020 107899198 102619605 102619247 100778442 100800328 100810922 100266796 100252573 100244518 7469919 7491593 7455616 11418867 11432874 11443023 101266987 101248777 101265553 102598288 102593182 102602101 107760390 107830540 107804674 4342469 4324616 9270404 100383306 100383827 100381748 123052820 123110922 123102741 123448450 123444525 123395413 8079273 8071953 8063275 100834129 100832490 100831891 5725633
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