Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 bra-r.6   103849140   pentatricopeptide repeat-containing protein At3g04750, mitochondrial 
 ath-u.5   AT3G04750   Tetratricopeptide repeat (TPR)-like superfamily protein 
 cit-r.1   102616557   pentatricopeptide repeat-containing protein At3g04750, mitochondrial 
 vvi-u.5   100248636   pentatricopeptide repeat-containing protein At3g04750, mitochondrial 
 osa-u.5   9266678   pentatricopeptide repeat-containing protein At3g04750, mitochondrial 
 zma-u.5   100281044   uncharacterized LOC100281044 
 sbi-r.1   8060485   pentatricopeptide repeat-containing protein At3g04750, mitochondrial 
 bdi-r.1   100820850   pentatricopeptide repeat-containing protein At3g04750, mitochondrial 

close


Top 50 coexpressed genes to 103849140 (bra-r.6 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 103849140 (bra-r.6 coexpression data)

CoexMap"106427402"


bnaLOC106427402 | Entrez gene ID : 106427402    
Species bra ath cit vvi osa zma sbi bdi gma sot cre ghi ppo sly nta tae mtr hvu bna
Paralog 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009451 [list] [network] RNA modification  (870 genes)  IEA  
GO CC
GO MF
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_013723577.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 4,  chlo 4,  cyto_mito 3,  nucl 1  (predict for XP_013723577.1)
Subcellular
localization
TargetP
mito 7,  other 4  (predict for XP_013723577.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bra-r.6
for
103849140
ath-u.5
for
AT3G04750
cit-r.1
for
102616557
vvi-u.5
for
100248636
osa-u.5
for
9266678
zma-u.5
for
100281044
sbi-r.1
for
8060485
bdi-r.1
for
100820850


Ortholog ID: 14725
Species bra ath cit vvi osa zma sbi bdi
Symbol LOC103849140 AT3G04750 LOC102616557 LOC100248636 LOC9266678 LOC100281044 LOC8060485 LOC100820850
Function* pentatricopeptide repeat-containing protein At3g04750, mitochondrial Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At3g04750, mitochondrial pentatricopeptide repeat-containing protein At3g04750, mitochondrial pentatricopeptide repeat-containing protein At3g04750, mitochondrial uncharacterized LOC100281044 pentatricopeptide repeat-containing protein At3g04750, mitochondrial pentatricopeptide repeat-containing protein At3g04750, mitochondrial
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 2
osa03040 Spliceosome 2
osa03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03008 Ribosome biogenesis in eukaryotes 2
bdi03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103849140 819635 102616557 100248636 9266678 100281044 8060485 100820850
The preparation time of this page was 0.1 [sec].