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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106427611   4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic 
 bna-r.1   106358453   4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic 
 bra-r.6   103829638   4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic 
 ath-u.5   CDPMEK   4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase 
 ghi-r.1   107953242   4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic 
 ghi-r.1   107954336   4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic 
 cit-r.1   102617443   4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic 
 gma-u.5   100812541   4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic-like 
 gma-u.5   100779074   4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic 
 vvi-u.5   100261596   4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic 
 ppo-u.5   7489301   4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic 
 ppo-u.5   7472988   4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic 
 mtr-u.5   25490472   4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic 
 sly-u.5   ispE   4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic 
 sot-r.1   102601451   4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic 
 nta-r.1   107822567   4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic 
 nta-r.1   107788194   4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic 
 osa-u.5   4327968   4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic-like 
 zma-u.5   100282760   uncharacterized LOC100282760 
 tae-r.2   123071089   4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic 
 tae-r.2   123079457   4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic 
 tae-r.2   123062324   4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic 
 hvu-r.1   123444625   4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic 
 sbi-r.1   8055258   4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic 
 bdi-r.1   100840505   4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic 
 cre-r.1   CHLRE_02g145050v5   uncharacterized protein 

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Top 50 coexpressed genes to 106427611 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106427611 (bna-r.1 coexpression data)

CoexMap"106427611"


bnaLOC106427611 | Entrez gene ID : 106427611    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 2 1 2 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00900 [list] [network] Terpenoid backbone biosynthesis (170 genes)
GO BP
GO:0016114 [list] [network] terpenoid biosynthetic process  (177 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (1821 genes)  IEA  
GO MF
GO:0050515 [list] [network] 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase activity  (2 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5995 genes)  IEA  
Protein XP_013723782.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for XP_013723782.1)
Subcellular
localization
TargetP
chlo 8,  mito 4  (predict for XP_013723782.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106427611
bna-r.1
for
106358453
bra-r.6
for
103829638
ath-u.5
for
CDPMEK
ghi-r.1
for
107953242
ghi-r.1
for
107954336
cit-r.1
for
102617443
gma-u.5
for
100812541
gma-u.5
for
100779074
vvi-u.5
for
100261596
ppo-u.5
for
7489301
ppo-u.5
for
7472988
mtr-u.5
for
25490472
sly-u.5
for
ispE
sot-r.1
for
102601451
nta-r.1
for
107822567
nta-r.1
for
107788194
osa-u.5
for
4327968
zma-u.5
for
100282760
tae-r.2
for
123071089
tae-r.2
for
123079457
tae-r.2
for
123062324
hvu-r.1
for
123444625
sbi-r.1
for
8055258
bdi-r.1
for
100840505
cre-r.1
for
CHLRE_02g145050v5


Ortholog ID: 9399
Species bna bna bra ath ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol LOC106427611 LOC106358453 LOC103829638 CDPMEK LOC107953242 LOC107954336 LOC102617443 LOC100812541 LOC100779074 LOC100261596 LOC7489301 LOC7472988 LOC25490472 ispE LOC102601451 LOC107822567 LOC107788194 LOC4327968 LOC100282760 LOC123071089 LOC123079457 LOC123062324 LOC123444625 LOC8055258 LOC100840505 CHLRE_02g145050v5
Function* 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic 4-(cytidine 5'-phospho)-2-C-methyl-D-erithritol kinase 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic-like 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic-like uncharacterized LOC100282760 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 6
bna00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00970 Aminoacyl-tRNA biosynthesis 5
bna00450 Selenocompound metabolism 2
bna00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 5
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 6
ghi03015 mRNA surveillance pathway 4
ghi04382 Cornified envelope formation 4
ghi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00900 Terpenoid backbone biosynthesis 7
cit01240 Biosynthesis of cofactors 3
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00900 Terpenoid backbone biosynthesis 9
gma04145 Phagosome 2
gma04148 Efferocytosis 2
gma04517 IgSF CAM signaling 2
gma04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00900 Terpenoid backbone biosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00860 Porphyrin metabolism 2
vvi00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00900 Terpenoid backbone biosynthesis 4
ppo01230 Biosynthesis of amino acids 3
ppo00290 Valine, leucine and isoleucine biosynthesis 2
ppo00660 C5-Branched dibasic acid metabolism 2
ppo01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00900 Terpenoid backbone biosynthesis 6
mtr00906 Carotenoid biosynthesis 4
mtr00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00900 Terpenoid backbone biosynthesis 5
sly00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
sot00500 Starch and sucrose metabolism 2
sot00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 4
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
nta01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00900 Terpenoid backbone biosynthesis 6
nta00220 Arginine biosynthesis 2
nta01210 2-Oxocarboxylic acid metabolism 2
nta01230 Biosynthesis of amino acids 2
nta00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00900 Terpenoid backbone biosynthesis 8
osa00730 Thiamine metabolism 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00900 Terpenoid backbone biosynthesis 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00900 Terpenoid backbone biosynthesis 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00900 Terpenoid backbone biosynthesis 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00900 Terpenoid backbone biosynthesis 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 2
bdi03060 Protein export 2
bdi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106427611 106358453 103829638 817234 107953242 107954336 102617443 100812541 100779074 100261596 7489301 7472988 25490472 543658 102601451 107822567 107788194 4327968 100282760 123071089 123079457 123062324 123444625 8055258 100840505 5720494
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