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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   111208294   F-box protein PP2-B10-like 
 bna-r.1   106428505   F-box protein At2g02240 
 bna-r.1   106428500   F-box protein At2g02240 
 bra-r.6   103834810   putative F-box protein PP2-B12 
 bra-r.6   103854109   F-box protein At2g02240 
 ath-u.5   PP2-B1   phloem protein 2-B1 
 ath-u.5   PP2-B11   phloem protein 2-B11 
 ath-u.5   PP2-B14   phloem protein 2-B14 
 ghi-r.1   107916912   F-box protein PP2-B11 
 ghi-r.1   107909082   putative F-box protein PP2-B12 
 cit-r.1   102630421   F-box protein PP2-B15-like 
 cit-r.1   102622116   F-box protein PP2-B10-like 
 gma-u.5   100795432   F-box protein PP2-B3 
 gma-u.5   100799869   putative F-box protein PP2-B12 
 gma-u.5   100800402   F-box protein PP2-like 
 vvi-u.5   100242049   putative F-box protein PP2-B12 
 vvi-u.5   100245523   F-box protein PP2-B10 
 ppo-u.5   7481717   F-box protein PP2-B15 
 ppo-u.5   18107514   putative F-box protein PP2-B12 
 ppo-u.5   7460514   F-box protein PP2-B10 
 mtr-u.5   11420818   F-box protein PP2-B10 
 mtr-u.5   11434610   F-box protein PP2-B10 
 mtr-u.5   11420814   F-box protein PP2-B11 
 sly-u.5   101264909   putative F-box protein PP2-B12 
 sly-u.5   101262356   F-box protein PP2-B15-like 
 sly-u.5   101262052   F-box protein PP2-B15 
 sot-r.1   102584683   F-box protein PP2-B1-like 
 sot-r.1   102588000   F-box protein PP2-B15-like 
 sot-r.1   102588330   F-box protein PP2-B15-like 
 nta-r.1   107804034   F-box protein PP2-B15 
 nta-r.1   107803003   putative F-box protein PP2-B12 
 nta-r.1   107801494   F-box protein PP2-B15 
 osa-u.5   4331110   F-box protein PP2-B10 
 osa-u.5   107279890   putative F-box protein PP2-B12 
 zma-u.5   100283810   ATPP2-B12 
 zma-u.5   100284620   uncharacterized LOC100284620 
 tae-r.2   123176462   F-box protein PP2-B10 
 tae-r.2   123146102   F-box protein PP2-B10 
 tae-r.2   123081689   F-box protein PP2-B10 
 hvu-r.1   123430810   F-box protein PP2-B10-like 
 hvu-r.1   123409295   F-box protein PP2-B11-like 
 hvu-r.1   123406370   F-box protein PP2-B10-like 
 sbi-r.1   8056425   F-box protein PP2-B10 
 sbi-r.1   8056426   putative F-box protein PP2-B12 
 sbi-r.1   8056427   F-box protein PP2-B10 
 bdi-r.1   100841554   putative F-box protein PP2-B12 

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Top 50 coexpressed genes to 111208294 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 111208294 (bna-r.1 coexpression data)

CoexMap"106428513"


bnaLOC106428513 | Entrez gene ID : 106428513    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 3 2 2 3 2 3 3 3 3 3 2 2 3 3 3 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (12789 genes)  IEA  
Protein XP_013724728.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  cyto 3,  extr 3,  nucl 1,  chlo_mito 1,  cyto_pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_013724728.1)
Subcellular
localization
TargetP
other 8  (predict for XP_013724728.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
111208294
bna-r.1
for
106428505
bna-r.1
for
106428500
bra-r.6
for
103834810
bra-r.6
for
103854109
ath-u.5
for
PP2-B1
ath-u.5
for
PP2-B11
ath-u.5
for
PP2-B14
ghi-r.1
for
107916912
ghi-r.1
for
107909082
cit-r.1
for
102630421
cit-r.1
for
102622116
gma-u.5
for
100795432
gma-u.5
for
100799869
gma-u.5
for
100800402
vvi-u.5
for
100242049
vvi-u.5
for
100245523
ppo-u.5
for
7481717
ppo-u.5
for
18107514
ppo-u.5
for
7460514
mtr-u.5
for
11420818
mtr-u.5
for
11434610
mtr-u.5
for
11420814
sly-u.5
for
101264909
sly-u.5
for
101262356
sly-u.5
for
101262052
sot-r.1
for
102584683
sot-r.1
for
102588000
sot-r.1
for
102588330
nta-r.1
for
107804034
nta-r.1
for
107803003
nta-r.1
for
107801494
osa-u.5
for
4331110
osa-u.5
for
107279890
zma-u.5
for
100283810
zma-u.5
for
100284620
tae-r.2
for
123176462
tae-r.2
for
123146102
tae-r.2
for
123081689
hvu-r.1
for
123430810
hvu-r.1
for
123409295
hvu-r.1
for
123406370
sbi-r.1
for
8056425
sbi-r.1
for
8056426
sbi-r.1
for
8056427
bdi-r.1
for
100841554


Ortholog ID: 155
Species bna bra bra bra ath ghi ghi ghi cit gma gma gma vvi vvi vvi ppo ppo mtr mtr mtr sly sly sly sot sot sot nta nta nta osa osa osa zma zma tae hvu hvu sbi sbi sbi bdi
Symbol LOC106396167 LOC103854109 LOC103827524 LOC103827523 PP2-B11 LOC107959572 LOC107959571 LOC121206275 LOC102621452 LOC100795432 LOC121174316 LOC100809502 LOC100245523 LOC100256275 LOC100241941 LOC7481717 LOC18107514 LOC11425550 LOC25485066 LOC25485069 LOC101264909 LOC101262356 LOC101266815 LOC102590468 LOC102591767 LOC107061040 LOC107768357 LOC107826476 LOC107814943 LOC4331110 LOC107279890 LOC9271663 LOC100283810 LOC100284620 LOC123176462 LOC123406370 LOC123395213 LOC8056425 LOC8056426 LOC110429515 LOC100841554
Function* putative F-box protein PP2-B2 F-box protein At2g02240 putative F-box protein PP2-B2 F-box protein PP2-B10-like phloem protein 2-B11 putative F-box protein PP2-B12 F-box protein PP2-B10 putative F-box protein PP2-B12 F-box protein At2g02240-like F-box protein PP2-B3 putative F-box protein PP2-B12 F-box protein PP2-B15 F-box protein PP2-B10 F-box protein PP2-B15 putative F-box protein PP2-B12 F-box protein PP2-B15 putative F-box protein PP2-B12 F-box protein VBF putative F-box protein PP2-B12 F-box protein PP2-B10 putative F-box protein PP2-B12 F-box protein PP2-B15-like putative F-box protein PP2-B12 F-box protein PP2-B10-like putative F-box protein PP2-B12 F-box protein PP2-B10-like putative F-box protein PP2-B12 putative F-box protein PP2-B12 F-box protein At2g02240 F-box protein PP2-B10 putative F-box protein PP2-B12 F-box protein PP2-B10 ATPP2-B12 uncharacterized LOC100284620 F-box protein PP2-B10 F-box protein PP2-B10-like putative F-box protein PP2-B12 F-box protein PP2-B10 putative F-box protein PP2-B12 F-box protein PP2-B11-like putative F-box protein PP2-B12
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 5
ath04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 2
cit03420 Nucleotide excision repair 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00330 Arginine and proline metabolism 3
vvi00710 Carbon fixation by Calvin cycle 2
vvi01200 Carbon metabolism 2
vvi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00051 Fructose and mannose metabolism 2
mtr00500 Starch and sucrose metabolism 2
mtr00520 Amino sugar and nucleotide sugar metabolism 2
mtr01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 4
sly04130 SNARE interactions in vesicular transport 2
sly03250 Viral life cycle - HIV-1 2
sly03272 Virion - Hepatitis viruses 2
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04016 MAPK signaling pathway - plant 2
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04142 Lysosome 2
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 2
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00402 Benzoxazinoid biosynthesis 4
tae00999 Biosynthesis of various plant secondary metabolites 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 5
bdi04120 Ubiquitin mediated proteolysis 4
bdi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106396167 103854109 103827524 103827523 844351 107959572 107959571 121206275 102621452 100795432 121174316 100809502 100245523 100256275 100241941 7481717 18107514 11425550 25485066 25485069 101264909 101262356 101266815 102590468 102591767 107061040 107768357 107826476 107814943 4331110 107279890 9271663 100283810 100284620 123176462 123406370 123395213 8056425 8056426 110429515 100841554
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