Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106428657   lysine-specific demethylase REF6 
 ath-u.5   REF6   relative of early flowering 6 
 gma-u.5   100775813   lysine-specific demethylase JMJ705 
 gma-u.5   100810437   lysine-specific demethylase REF6 
 gma-u.5   100810972   lysine-specific demethylase REF6 
 vvi-u.5   100241632   lysine-specific demethylase REF6 
 ppo-u.5   7463086   lysine-specific demethylase REF6 
 ppo-u.5   7484447   lysine-specific demethylase REF6 
 mtr-u.5   25489508   lysine-specific demethylase REF6 
 sly-u.5   101257458   lysine-specific demethylase REF6 
 osa-u.5   4351981   lysine-specific demethylase JMJ705-like 
 osa-u.5   4324980   lysine-specific demethylase JMJ705-like 
 zma-u.5   103636385   lysine-specific demethylase JMJ705 
 zma-u.5   103640927   lysine-specific demethylase JMJ705 

close


Top 50 coexpressed genes to 106428657 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 106428657 (bna-r.1 coexpression data)

CoexMap"106428657"


bnaLOC106428657 | Entrez gene ID : 106428657    
Species bna ath gma vvi ppo mtr sly osa zma cre ghi cit hvu bdi sot bra sbi tae nta
Paralog 1 1 3 1 2 1 1 2 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006338 [list] [network] chromatin remodeling  (373 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0034647 [list] [network] histone H3K4me/H3K4me2/H3K4me3 demethylase activity  (26 genes)  IEA  
Protein XP_013724852.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_013724852.1)
Subcellular
localization
TargetP
other 6  (predict for XP_013724852.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106428657

.
ath-u.5
for
REF6

.
gma-u.5
for
100775813

.
gma-u.5
for
100810437

.
gma-u.5
for
100810972

.
vvi-u.5
for
100241632

.
ppo-u.5
for
7463086

.
ppo-u.5
for
7484447

.
mtr-u.5
for
25489508

.
sly-u.5
for
101257458

.
osa-u.5
for
4351981

.
osa-u.5
for
4324980

.
zma-u.5
for
103636385

.
zma-u.5
for
103640927

.


Ortholog ID: 5322
Species ath gma gma sly osa osa zma zma bra vvi ppo ppo mtr tae tae hvu ghi ghi bna bna sbi sbi sot cit bdi bdi nta nta
Symbol REF6 LOC100775271 LOC100775813 LOC101257458 LOC4324980 LOC4351981 LOC103640927 LOC103636385 LOC103873145 LOC100241632 LOC7484447 LOC7463086 LOC25489508 LOC123110916 LOC123102786 LOC123399994 LOC107931453 LOC107953566 LOC111199047 LOC106428657 LOC8155407 LOC8056139 LOC102605874 LOC102615321 LOC100839458 LOC100836246 LOC107791367 LOC107761881
Function* relative of early flowering 6 lysine-specific demethylase REF6 lysine-specific demethylase JMJ705 lysine-specific demethylase REF6 lysine-specific demethylase JMJ705-like lysine-specific demethylase JMJ705-like lysine-specific demethylase JMJ705 lysine-specific demethylase JMJ705 lysine-specific demethylase REF6 lysine-specific demethylase REF6 lysine-specific demethylase REF6 lysine-specific demethylase REF6 lysine-specific demethylase REF6 lysine-specific demethylase JMJ705 lysine-specific demethylase JMJ705 lysine-specific demethylase JMJ705-like lysine-specific demethylase REF6 lysine-specific demethylase REF6 lysine-specific demethylase REF6-like lysine-specific demethylase REF6 lysine-specific demethylase JMJ705 lysine-specific demethylase JMJ705 lysine-specific demethylase REF6 lysine-specific demethylase REF6 lysine-specific demethylase JMJ705 lysine-specific demethylase JMJ705 lysine-specific demethylase JMJ705 lysine-specific demethylase JMJ705
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 2
ath00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 3
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03020 RNA polymerase 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
ppo03083 Polycomb repressive complex 2
ppo03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00730 Thiamine metabolism 2
bna00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00730 Thiamine metabolism 2
bna00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
sot04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03460 Fanconi anemia pathway 3
bdi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta04626 Plant-pathogen interaction 2
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824002 100775271 100775813 101257458 4324980 4351981 103640927 103636385 103873145 100241632 7484447 7463086 25489508 123110916 123102786 123399994 107931453 107953566 111199047 106428657 8155407 8056139 102605874 102615321 100839458 100836246 107791367 107761881
The preparation time of this page was 0.4 [sec].