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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106428764   arginine decarboxylase 2 
 ath-u.5   ADC1   arginine decarboxylase 1 
 ath-u.5   ADC2   arginine decarboxylase 2 
 gma-u.5   ADC   arginine decarboxylase 
 gma-u.5   100793552   arginine decarboxylase 
 vvi-u.5   100233080   arginine decarboxylase 
 ppo-u.5   7453603   arginine decarboxylase 
 mtr-u.5   11438086   arginine decarboxylase 
 sly-u.5   adc1   arginine decarboxylase 
 sly-u.5   ADC   arginine decarboxylase 
 osa-u.5   4340008   arginine decarboxylase 1-like 
 zma-u.5   103638134   arginine decarboxylase 1 

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Top 50 coexpressed genes to 106428764 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106428764 (bna-r.1 coexpression data)

CoexMap"106428764"


bnaLOC106428764 | Entrez gene ID : 106428764    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 2 2 1 1 1 2 1 1 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00330 [list] [network] Arginine and proline metabolism (179 genes)
GO BP
GO:0006527 [list] [network] L-arginine catabolic process  (13 genes)  IEA  
GO:0008295 [list] [network] spermidine biosynthetic process  (37 genes)  IEA  
GO CC
GO MF
GO:0008792 [list] [network] arginine decarboxylase activity  (9 genes)  IEA  
Protein XP_013724975.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  nucl 1,  vacu 1,  cysk 1,  nucl_plas 1  (predict for XP_013724975.1)
Subcellular
localization
TargetP
chlo 6,  other 5  (predict for XP_013724975.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106428764

.
ath-u.5
for
ADC1

.
ath-u.5
for
ADC2

.
gma-u.5
for
ADC

.
gma-u.5
for
100793552

.
vvi-u.5
for
100233080

.
ppo-u.5
for
7453603

.
mtr-u.5
for
11438086

.
sly-u.5
for
adc1

.
sly-u.5
for
ADC

.
osa-u.5
for
4340008

.
zma-u.5
for
103638134

.


Ortholog ID: 4514
Species ath ath gma gma sly sly osa zma bra bra vvi ppo mtr tae tae hvu ghi ghi bna bna sbi sot sot cit bdi nta nta
Symbol ADC1 ADC2 LOC100793552 ADC adc1 ADC LOC4340008 LOC103638134 LOC103834394 LOC103862369 LOC100233080 LOC7453603 LOC11438086 LOC100682517 LOC123120950 LOC123413577 LOC107949089 LOC107893794 LOC106352939 LOC106428764 LOC8068388 LOC102600980 LOC102596487 LOC102608169 LOC100831880 LOC107759371 LOC107796783
Function* arginine decarboxylase 1 arginine decarboxylase 2 arginine decarboxylase arginine decarboxylase arginine decarboxylase arginine decarboxylase arginine decarboxylase 1-like arginine decarboxylase 1 arginine decarboxylase 2 arginine decarboxylase 2 arginine decarboxylase arginine decarboxylase arginine decarboxylase arginine decarboxylase 1 arginine decarboxylase 1-like arginine decarboxylase 1 arginine decarboxylase arginine decarboxylase arginine decarboxylase 2-like arginine decarboxylase 2 arginine decarboxylase 1 arginine decarboxylase arginine decarboxylase arginine decarboxylase arginine decarboxylase 1 arginine decarboxylase 1B, chloroplastic arginine decarboxylase-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 3
ath04146 Peroxisome 3
ath00330 Arginine and proline metabolism 3
ath00052 Galactose metabolism 2
ath00220 Arginine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00270 Cysteine and methionine metabolism 4
gma00330 Arginine and proline metabolism 4
gma00020 Citrate cycle (TCA cycle) 2
gma00566 Sulfoquinovose metabolism 2
gma00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00330 Arginine and proline metabolism 4
gma00270 Cysteine and methionine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00330 Arginine and proline metabolism 4
sly04626 Plant-pathogen interaction 2
sly00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00330 Arginine and proline metabolism 5
sly00940 Phenylpropanoid biosynthesis 4
sly00270 Cysteine and methionine metabolism 3
sly01230 Biosynthesis of amino acids 3
sly00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 6
zma00020 Citrate cycle (TCA cycle) 5
zma00190 Oxidative phosphorylation 3
zma01210 2-Oxocarboxylic acid metabolism 2
zma01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00220 Arginine biosynthesis 2
vvi00250 Alanine, aspartate and glutamate metabolism 2
vvi00910 Nitrogen metabolism 2
vvi01200 Carbon metabolism 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00330 Arginine and proline metabolism 3
ppo00052 Galactose metabolism 2
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 4
mtr04626 Plant-pathogen interaction 2
mtr00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00330 Arginine and proline metabolism 3
tae03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00330 Arginine and proline metabolism 3
tae03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 7
hvu00360 Phenylalanine metabolism 5
hvu00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
hvu01230 Biosynthesis of amino acids 3
hvu00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00330 Arginine and proline metabolism 4
ghi00630 Glyoxylate and dicarboxylate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00330 Arginine and proline metabolism 7
bna00190 Oxidative phosphorylation 2
bna00910 Nitrogen metabolism 2
bna01310 Nitrogen cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00330 Arginine and proline metabolism 7
bna00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00230 Purine metabolism 2
sbi00250 Alanine, aspartate and glutamate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 4
sot00330 Arginine and proline metabolism 3
sot00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
sot00630 Glyoxylate and dicarboxylate metabolism 2
sot00941 Flavonoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 4
sot00330 Arginine and proline metabolism 4
sot00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
sot01230 Biosynthesis of amino acids 3
sot00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 4
nta00410 beta-Alanine metabolism 2
nta00620 Pyruvate metabolism 2
nta00710 Carbon fixation by Calvin cycle 2
nta01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
nta01230 Biosynthesis of amino acids 6
nta00330 Arginine and proline metabolism 4
nta00270 Cysteine and methionine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816149 829623 100793552 548071 543807 543960 4340008 103638134 103834394 103862369 100233080 7453603 11438086 100682517 123120950 123413577 107949089 107893794 106352939 106428764 8068388 102600980 102596487 102608169 100831880 107759371 107796783
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