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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106428867   pumilio homolog 5-like 
 bna-r.1   125608831   pumilio homolog 5-like 
 bna-r.1   106346520   pumilio homolog 6, chloroplastic-like 
 bna-r.1   125587979   pumilio homolog 5-like 
 bra-r.6   103863640   pumilio homolog 6, chloroplastic 
 bra-r.6   103869342   pumilio homolog 5 
 bra-r.6   103859846   pumilio homolog 5 
 ath-u.5   PUM5   pumilio 5 
 ath-u.5   PUM6   pumilio 6 
 ghi-r.1   107887110   pumilio homolog 5 
 ghi-r.1   107910598   pumilio homolog 5 
 cit-r.1   102607004   pumilio homolog 5 
 cit-r.1   102621102   pumilio homolog 6, chloroplastic 
 gma-u.5   100819166   pumilio homolog 6, chloroplastic 
 gma-u.5   100811036   pumilio homolog 6, chloroplastic 
 gma-u.5   100780168   pumilio homolog 6, chloroplastic 
 vvi-u.5   100254662   pumilio domain-containing protein PPD1-like 
 ppo-u.5   7490841   pumilio homolog 5 
 ppo-u.5   18111187   pumilio homolog 6, chloroplastic 
 ppo-u.5   18100470   pumilio homolog 6, chloroplastic 
 mtr-u.5   11445389   pumilio homolog 6, chloroplastic 
 sly-u.5   101263093   pumilio homolog 5 
 sot-r.1   102602234   pumilio homolog 5 
 nta-r.1   107786023   pumilio homolog 5 
 nta-r.1   107827427   pumilio homolog 5 
 osa-u.5   4346059   pumilio homolog 5 
 osa-u.5   4347460   pumilio homolog 5 
 zma-u.5   103653177   pumilio homolog 3 
 zma-u.5   100193145   uncharacterized LOC100193145 
 tae-r.2   123151455   pumilio homolog 5 
 tae-r.2   123121994   pumilio homolog 5 
 tae-r.2   123112488   pumilio homolog 5 
 hvu-r.1   123413488   pumilio homolog 5-like 
 hvu-r.1   123399562   pumilio homolog 5-like 
 sbi-r.1   110436972   pumilio homolog 5-like 
 bdi-r.1   100831658   pumilio homolog 5 

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Top 50 coexpressed genes to 106428867 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106428867 (bna-r.1 coexpression data)

CoexMap"106428867"


bnaLOC106428867 | Entrez gene ID : 106428867    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 2 2 2 3 1 3 1 1 1 2 2 2 3 2 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0061158 [list] [network] 3'-UTR-mediated mRNA destabilization  (5 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (16489 genes)  IEA  
GO MF
GO:0003729 [list] [network] mRNA binding  (918 genes)  IEA  
Protein XP_013725066.2 [sequence] [blastp]
XP_013725068.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for XP_013725066.2)
nucl 10  (predict for XP_013725068.2)
Subcellular
localization
TargetP
other 6  (predict for XP_013725066.2)
other 6  (predict for XP_013725068.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106428867
bna-r.1
for
125608831
bna-r.1
for
106346520
bna-r.1
for
125587979
bra-r.6
for
103863640
bra-r.6
for
103869342
bra-r.6
for
103859846
ath-u.5
for
PUM5
ath-u.5
for
PUM6
ghi-r.1
for
107887110
ghi-r.1
for
107910598
cit-r.1
for
102607004
cit-r.1
for
102621102
gma-u.5
for
100819166
gma-u.5
for
100811036
gma-u.5
for
100780168
vvi-u.5
for
100254662
ppo-u.5
for
7490841
ppo-u.5
for
18111187
ppo-u.5
for
18100470
mtr-u.5
for
11445389
sly-u.5
for
101263093
sot-r.1
for
102602234
nta-r.1
for
107786023
nta-r.1
for
107827427
osa-u.5
for
4346059
osa-u.5
for
4347460
zma-u.5
for
103653177
zma-u.5
for
100193145
tae-r.2
for
123151455
tae-r.2
for
123121994
tae-r.2
for
123112488
hvu-r.1
for
123413488
hvu-r.1
for
123399562
sbi-r.1
for
110436972
bdi-r.1
for
100831658


Ortholog ID: 3693
Species bna bna bna bra bra bra ath ath ghi ghi cit cit gma gma gma vvi ppo ppo ppo mtr sly sot nta nta osa osa zma zma tae tae tae hvu hvu sbi bdi
Symbol LOC106346520 LOC125587979 LOC106389288 LOC103863640 LOC103859846 LOC103861595 PUM5 PUM6 LOC107887110 LOC107910598 LOC102607004 LOC102621102 LOC100819166 LOC100811036 LOC100780168 LOC100254662 LOC7490841 LOC18111187 LOC18100470 LOC11445389 LOC101263093 LOC102602234 LOC107786023 LOC107827427 LOC4346059 LOC4347460 LOC103653177 LOC100193145 LOC123112488 LOC123157024 LOC123170346 LOC123413488 LOC123399562 LOC110436972 LOC100831658
Function* pumilio homolog 6, chloroplastic-like pumilio homolog 5-like pumilio homolog 5-like pumilio homolog 6, chloroplastic pumilio homolog 5 pumilio homolog 6, chloroplastic pumilio 5 pumilio 6 pumilio homolog 5 pumilio homolog 5 pumilio homolog 5 pumilio homolog 6, chloroplastic pumilio homolog 6, chloroplastic pumilio homolog 6, chloroplastic pumilio homolog 6, chloroplastic pumilio domain-containing protein PPD1-like pumilio homolog 5 pumilio homolog 6, chloroplastic pumilio homolog 6, chloroplastic pumilio homolog 6, chloroplastic pumilio homolog 5 pumilio homolog 5 pumilio homolog 5 pumilio homolog 5 pumilio homolog 5 pumilio homolog 5 pumilio homolog 3 uncharacterized LOC100193145 pumilio homolog 5 pumilio homolog 5 pumilio homolog 5 pumilio homolog 5-like pumilio homolog 5-like pumilio homolog 5-like pumilio homolog 5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 2
bna04075 Plant hormone signal transduction 2
bna00061 Fatty acid biosynthesis 2
bna00071 Fatty acid degradation 2
bna01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00061 Fatty acid biosynthesis 2
bna00071 Fatty acid degradation 2
bna01212 Fatty acid metabolism 2
bna04146 Peroxisome 2
bna00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 4
ghi04120 Ubiquitin mediated proteolysis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 4
ghi04120 Ubiquitin mediated proteolysis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 7
gma04626 Plant-pathogen interaction 5
gma03018 RNA degradation 2
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04136 Autophagy - other 2
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 3
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 3
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 7
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03013 Nucleocytoplasmic transport 7
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00562 Inositol phosphate metabolism 2
sbi04070 Phosphatidylinositol signaling system 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106346520 125587979 106389288 103863640 103859846 103861595 821569 828694 107887110 107910598 102607004 102621102 100819166 100811036 100780168 100254662 7490841 18111187 18100470 11445389 101263093 102602234 107786023 107827427 4346059 4347460 103653177 100193145 123112488 123157024 123170346 123413488 123399562 110436972 100831658
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