ATTED-II : GeneCoexpression result

Species	Gene	Description
bna-r.1	106429361	ATP-dependent DNA helicase 2 subunit KU80
ath-u.5	KU80	Ku80 family protein
gma-u.5	100781545	ATP-dependent DNA helicase 2 subunit KU80
vvi-u.5	100250596	ATP-dependent DNA helicase 2 subunit KU80
vvi-u.5	100255780	ATP-dependent DNA helicase 2 subunit KU80
ppo-u.5	7464861	ATP-dependent DNA helicase 2 subunit KU80
mtr-u.5	11423056	ATP-dependent DNA helicase 2 subunit KU80
sly-u.5	101253129	ATP-dependent DNA helicase 2 subunit KU80
osa-u.5	9267125	ATP-dependent DNA helicase 2 subunit KU80-like
zma-u.5	100281554	uncharacterized LOC100281554

functional annotation

KEGG

bna03450 [list] [network] Non-homologous end-joining (13 genes)

GO BP

GO:0071480 [list] [network] cellular response to gamma radiation	(3 genes)	IEA
GO:0071481 [list] [network] cellular response to X-ray	(3 genes)	IEA
GO:0006303 [list] [network] double-strand break repair via nonhomologous end joining	(21 genes)	IEA
GO:0000723 [list] [network] telomere maintenance	(388 genes)	IEA
GO:0006310 [list] [network] DNA recombination	(692 genes)	IEA

GO CC

GO:0043564 [list] [network] Ku70:Ku80 complex	(3 genes)	IEA
GO:0005634 [list] [network] nucleus	(9971 genes)	IEA

GO MF

GO:0042162 [list] [network] telomeric DNA binding	(176 genes)	IEA
GO:0003684 [list] [network] damaged DNA binding	(195 genes)	IEA
GO:0003678 [list] [network] DNA helicase activity	(310 genes)	IEA
GO:0003690 [list] [network] double-stranded DNA binding	(1590 genes)	IEA

Protein

XP_013725566.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 6, cyto 2, nucl 1, extr 1

(predict for XP_013725566.2)

Subcellular
localization
TargetP

other 7, scret 3

(predict for XP_013725566.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106429361	ath-u.5 for KU80	gma-u.5 for 100781545	vvi-u.5 for 100250596	vvi-u.5 for 100255780	ppo-u.5 for 7464861	mtr-u.5 for 11423056	sly-u.5 for 101253129	osa-u.5 for 9267125	zma-u.5 for 100281554

Ortholog ID: 11079

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

KU80

Function^*

ATP-dependent DNA helicase 2 subunit KU80

Ku80 family protein

ATP-dependent DNA helicase 2 subunit KU80

ATP-dependent DNA helicase 2 subunit KU80-like

uncharacterized LOC100281554

ATP-dependent DNA helicase 2 subunit KU80

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	4
ghi03450	Non-homologous end-joining	4
ghi03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03013	Nucleocytoplasmic transport	4
ghi03450	Non-homologous end-joining	4
ghi03440	Homologous recombination	2
ghi03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03430	Mismatch repair	3
gma03030	DNA replication	2
gma03420	Nucleotide excision repair	2
gma03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03030	DNA replication	3
ppo03430	Mismatch repair	3
ppo03410	Base excision repair	2
ppo03420	Nucleotide excision repair	2
ppo03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03013	Nucleocytoplasmic transport	3
mtr03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	2
sot03450	Non-homologous end-joining	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2
nta03082	ATP-dependent chromatin remodeling	2
nta03450	Non-homologous end-joining	2
nta03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2
nta03082	ATP-dependent chromatin remodeling	2
nta03450	Non-homologous end-joining	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00190	Oxidative phosphorylation	3
osa04145	Phagosome	2
osa00520	Amino sugar and nucleotide sugar metabolism	2
osa01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03013	Nucleocytoplasmic transport	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03040	Spliceosome	3
tae03450	Non-homologous end-joining	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00340	Histidine metabolism	3
tae01230	Biosynthesis of amino acids	3
tae03450	Non-homologous end-joining	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00970	Aminoacyl-tRNA biosynthesis	2
sbi03450	Non-homologous end-joining	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03430	Mismatch repair	3
bdi03460	Fanconi anemia pathway	2
bdi03020	RNA polymerase	2

Expression

Expression pattern

Entrez Gene ID^*

106429361

103833047

841223

107941746

107911912

102626662

100781545

100255780

100250596

7464861

11423056

101253129

102579031

107831338

107773758

9267125

100281554

101290622

123114443

123395211

8059256

100830366

5728221

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 106429361 (bna-r.1 coexpression data)

Top 50 enrichment test to 106429361 (bna-r.1 coexpression data)


Species	bna	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	sbi	ghi	sot	nta	cre	tae
Paralog	1	1	1	2	1	1	1	1	1	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106429361 (bna-r.1 coexpression data)

Top 50 enrichment test to 106429361 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**