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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106430472   exonuclease V, chloroplastic 
 bna-r.1   106385845   exonuclease V, chloroplastic-like 
 bra-r.6   103851511   exonuclease V, chloroplastic 
 ath-u.5   AT5G60370   exonuclease V-like protein 
 ghi-r.1   107909312   exonuclease V, chloroplastic 
 ghi-r.1   107886678   exonuclease V, chloroplastic 
 cit-r.1   102618279   exonuclease V, chloroplastic 
 gma-u.5   100792136   exonuclease V, chloroplastic 
 mtr-u.5   11410049   exonuclease V, chloroplastic 
 sly-u.5   101247290   exonuclease V, chloroplastic 
 sot-r.1   102600414   exonuclease V, chloroplastic 
 nta-r.1   107811336   exonuclease V, chloroplastic 
 nta-r.1   142161678   exonuclease V, chloroplastic-like 
 osa-u.5   107275835   exonuclease V, chloroplastic 
 zma-u.5   100279337   uncharacterized LOC100279337 
 tae-r.2   123168094   exonuclease V, chloroplastic 
 tae-r.2   123161835   exonuclease V, chloroplastic 
 hvu-r.1   123411785   exonuclease V, chloroplastic 
 sbi-r.1   8071253   exonuclease V, chloroplastic 
 bdi-r.1   100829810   exonuclease V, chloroplastic 

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Top 50 coexpressed genes to 106430472 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106430472 (bna-r.1 coexpression data)

CoexMap"106430472"


bnaLOC106430472 | Entrez gene ID : 106430472    
Species bna bra ath ghi cit gma mtr sly sot nta osa zma tae hvu sbi bdi cre ppo vvi
Paralog 2 1 1 2 1 1 1 1 1 2 1 1 2 1 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0036297 [list] [network] interstrand cross-link repair  (26 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0045145 [list] [network] single-stranded DNA 5'-3' DNA exonuclease activity  (2 genes)  IEA  
Protein XP_013726716.2 [sequence] [blastp]
XP_048602562.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 3,  cyto_nucl 3,  nucl_plas 3  (predict for XP_013726716.2)
cyto 4,  chlo 2,  nucl 2,  plas 2,  nucl_plas 2  (predict for XP_048602562.1)
Subcellular
localization
TargetP
other 7,  chlo 5  (predict for XP_013726716.2)
other 7,  chlo 5  (predict for XP_048602562.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106430472
bna-r.1
for
106385845
bra-r.6
for
103851511
ath-u.5
for
AT5G60370
ghi-r.1
for
107909312
ghi-r.1
for
107886678
cit-r.1
for
102618279
gma-u.5
for
100792136
mtr-u.5
for
11410049
sly-u.5
for
101247290
sot-r.1
for
102600414
nta-r.1
for
107811336
nta-r.1
for
142161678
osa-u.5
for
107275835
zma-u.5
for
100279337
tae-r.2
for
123168094
tae-r.2
for
123161835
hvu-r.1
for
123411785
sbi-r.1
for
8071253
bdi-r.1
for
100829810


Ortholog ID: 11348
Species bna bna bra ath ghi ghi cit gma mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol LOC106430472 LOC106385845 LOC103851511 AT5G60370 LOC107909312 LOC107886678 LOC102618279 LOC100792136 LOC11410049 LOC101247290 LOC102600414 LOC107811336 LOC142161678 LOC107275835 LOC100279337 LOC123168094 LOC123161835 LOC123411785 LOC8071253 LOC100829810
Function* exonuclease V, chloroplastic exonuclease V, chloroplastic-like exonuclease V, chloroplastic exonuclease V-like protein exonuclease V, chloroplastic exonuclease V, chloroplastic exonuclease V, chloroplastic exonuclease V, chloroplastic exonuclease V, chloroplastic exonuclease V, chloroplastic exonuclease V, chloroplastic exonuclease V, chloroplastic exonuclease V, chloroplastic-like exonuclease V, chloroplastic uncharacterized LOC100279337 exonuclease V, chloroplastic exonuclease V, chloroplastic exonuclease V, chloroplastic exonuclease V, chloroplastic exonuclease V, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 7
bna00280 Valine, leucine and isoleucine degradation 4
bna00650 Butanoate metabolism 4
bna04146 Peroxisome 4
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 5
bna00280 Valine, leucine and isoleucine degradation 4
bna00650 Butanoate metabolism 4
bna04146 Peroxisome 4
bna04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03083 Polycomb repressive complex 2
sly00564 Glycerophospholipid metabolism 2
sly00071 Fatty acid degradation 2
sly00592 alpha-Linolenic acid metabolism 2
sly01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00410 beta-Alanine metabolism 2
sot00640 Propanoate metabolism 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
nta01230 Biosynthesis of amino acids 2
nta04120 Ubiquitin mediated proteolysis 2
nta04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03083 Polycomb repressive complex 2
nta03250 Viral life cycle - HIV-1 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00020 Citrate cycle (TCA cycle) 3
tae00280 Valine, leucine and isoleucine degradation 3
tae00650 Butanoate metabolism 3
tae00900 Terpenoid backbone biosynthesis 3
tae03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00280 Valine, leucine and isoleucine degradation 3
tae00650 Butanoate metabolism 3
tae00900 Terpenoid backbone biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106430472 106385845 103851511 836159 107909312 107886678 102618279 100792136 11410049 101247290 102600414 107811336 142161678 107275835 100279337 123168094 123161835 123411785 8071253 100829810
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