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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106388174   high mobility group B protein 1-like 
 bna-r.1   106376908   high mobility group B protein 1 
 bna-r.1   106366050   high mobility group B protein 7 
 bra-r.6   103865488   high mobility group B protein 7 
 bra-r.6   103829416   high mobility group B protein 3 
 ath-u.5   AT5G23405   HMG-box (high mobility group) DNA-binding family protein 
 ath-u.5   HMGB3   high mobility group B3 
 ath-u.5   HMGB2   high mobility group B2 
 ghi-r.1   107958066   high mobility group B protein 1 
 ghi-r.1   107955623   HMG1/2-like protein 
 ghi-r.1   107955086   HMG1/2-like protein 
 cit-r.1   HMG   group B HMG-box protein 
 cit-r.1   102627764   high mobility group B protein 1-like 
 gma-u.5   100820624   high mobility group B protein 14 
 gma-u.5   100819349   FACT complex subunit SSRP1 
 vvi-u.5   100246802   high mobility group B protein 1-like 
 vvi-u.5   100264012   high mobility group B protein 14 
 vvi-u.5   100257544   high mobility group B2 protein-like 
 ppo-u.5   7474442   high mobility group B protein 1 
 ppo-u.5   7462998   high mobility group B protein 14 
 ppo-u.5   7465590   high mobility group B protein 7 
 mtr-u.5   11407325   HMG1/2-like protein 
 mtr-u.5   11405962   high mobility group B protein 1 
 mtr-u.5   11437209   uncharacterized LOC11437209 
 sly-u.5   101247480   high mobility group B protein 14 
 sly-u.5   101257131   HMG1/2-like protein 
 sly-u.5   101247954   high mobility group B protein 1 
 sot-r.1   102594501   HMG1/2-like protein 
 sot-r.1   102599000   high mobility group B protein 7-like 
 nta-r.1   107829967   HMG1/2-like protein 
 nta-r.1   107828168   high mobility group B protein 14 
 nta-r.1   107812199   high mobility group B protein 14-like 
 osa-u.5   4336676   DNA-binding protein MNB1B 
 osa-u.5   4347789   HMG1/2-like protein 
 osa-u.5   4330271   HMG1/2-like protein 
 zma-u.5   541951   high mobility group box protein 2 
 zma-u.5   109944069   HMG1/2-like protein 
 tae-r.2   543333   HMG1/2-like protein 
 tae-r.2   123078748   high mobility group B protein 14 
 tae-r.2   123070299   high mobility group B protein 14 
 hvu-r.1   123427494   DNA-binding protein MNB1B-like 
 hvu-r.1   123410844   high mobility group B protein 7-like 
 hvu-r.1   123407018   HMG1/2-like protein 
 sbi-r.1   110431028   DNA-binding protein MNB1B 
 sbi-r.1   110432329   HMG1/2-like protein 
 sbi-r.1   110434397   HMG1/2-like protein 
 bdi-r.1   100823983   high mobility group B protein 14 
 bdi-r.1   100825064   DNA-binding protein MNB1B 
 bdi-r.1   100829543   HMG1/2-like protein 
 cre-r.1   CHLRE_16g672300v5   uncharacterized protein 
 cre-r.1   CHLRE_11g480950v5   uncharacterized protein 
 cre-r.1   CHLRE_06g261450v5   uncharacterized protein 

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Top 50 coexpressed genes to 106388174 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106388174 (bna-r.1 coexpression data)

CoexMap"106432797"


bnaLOC106432797 | Entrez gene ID : 106432797    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 2 3 3 2 2 3 3 3 3 2 3 3 2 3 3 3 3 3
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_013729098.1 [sequence] [blastp]
XP_022557120.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  mito 2,  chlo 1,  extr 1  (predict for XP_013729098.1)
nucl 9,  plas 1,  extr 1  (predict for XP_022557120.1)
Subcellular
localization
TargetP
chlo 5,  mito 5  (predict for XP_013729098.1)
other 7,  chlo 3  (predict for XP_022557120.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106388174
bna-r.1
for
106376908
bna-r.1
for
106366050
bra-r.6
for
103865488
bra-r.6
for
103829416
ath-u.5
for
AT5G23405
ath-u.5
for
HMGB3
ath-u.5
for
HMGB2
ghi-r.1
for
107958066
ghi-r.1
for
107955623
ghi-r.1
for
107955086
cit-r.1
for
HMG
cit-r.1
for
102627764
gma-u.5
for
100820624
gma-u.5
for
100819349
vvi-u.5
for
100246802
vvi-u.5
for
100264012
vvi-u.5
for
100257544
ppo-u.5
for
7474442
ppo-u.5
for
7462998
ppo-u.5
for
7465590
mtr-u.5
for
11407325
mtr-u.5
for
11405962
mtr-u.5
for
11437209
sly-u.5
for
101247480
sly-u.5
for
101257131
sly-u.5
for
101247954
sot-r.1
for
102594501
sot-r.1
for
102599000
nta-r.1
for
107829967
nta-r.1
for
107828168
nta-r.1
for
107812199
osa-u.5
for
4336676
osa-u.5
for
4347789
osa-u.5
for
4330271
zma-u.5
for
541951
zma-u.5
for
109944069
tae-r.2
for
543333
tae-r.2
for
123078748
tae-r.2
for
123070299
hvu-r.1
for
123427494
hvu-r.1
for
123410844
hvu-r.1
for
123407018
sbi-r.1
for
110431028
sbi-r.1
for
110432329
sbi-r.1
for
110434397
bdi-r.1
for
100823983
bdi-r.1
for
100825064
bdi-r.1
for
100829543
cre-r.1
for
CHLRE_16g672300v5
cre-r.1
for
CHLRE_11g480950v5
cre-r.1
for
CHLRE_06g261450v5


Ortholog ID: 226
Species bna bna bna bra bra ath ath ath ghi ghi ghi cit cit cit gma gma gma vvi vvi vvi ppo ppo ppo mtr mtr mtr sly sly sly sot sot nta nta nta osa osa osa zma zma zma tae tae tae hvu hvu hvu sbi sbi sbi bdi bdi bdi cre cre cre
Symbol LOC106345995 LOC111197968 LOC106416143 LOC103845936 LOC103854899 HMGB3 HMGB2 HMGB5 LOC107920412 LOC107922191 LOC107890968 HMG LOC102619973 LOC102630695 LOC100305961 LOC100305957 LOC100499992 LOC100246802 LOC100257544 LOC100247584 LOC7474442 LOC7488016 LOC7494705 LOC11405962 LOC25481021 LOC25485684 LOC101257131 LOC101247954 LOC101247008 LOC102599000 LOC102583623 LOC107808275 LOC107760218 LOC107781188 LOC4336676 LOC4330271 LOC4344416 LOC109944069 LOC541987 LOC541952 LOC780567 LOC123080756 LOC123172882 LOC123410844 LOC123402298 LOC123444045 LOC110431028 LOC110432329 LOC110436389 LOC100829543 LOC100838667 LOC100821521 CHLRE_16g672300v5 CHLRE_11g480950v5 CHLRE_06g261450v5
Function* high mobility group B protein 4 high mobility group B protein 3-like high mobility group B protein 2 high mobility group B protein 4 high mobility group B protein 7 high mobility group B3 high mobility group B2 high mobility group B5 high mobility group B protein 1 high mobility group B protein 3 high mobility group B protein 1 group B HMG-box protein high mobility group B protein 3 high mobility group B protein 4 uncharacterized LOC100305961 uncharacterized LOC100305957 uncharacterized LOC100499992 high mobility group B protein 1-like high mobility group B2 protein-like high mobility group B protein 7 high mobility group B protein 1 high mobility group B protein 1 high mobility group B protein 3 high mobility group B protein 1 uncharacterized LOC25481021 high mobility group B protein 7 HMG1/2-like protein high mobility group B protein 1 high mobility group B protein 7 high mobility group B protein 7-like HMG1/2-like protein HMG1/2-like protein high mobility group B protein 7 HMG1/2-like protein DNA-binding protein MNB1B HMG1/2-like protein high mobility group B protein 7 HMG1/2-like protein nucleosome/chromatin assembly factor D nucleosome/chromatin assembly factor D DNA-binding protein MNB1B high mobility group B protein 4 HMG1/2-like protein high mobility group B protein 7-like DNA-binding protein MNB1B-like high mobility group B protein 14 DNA-binding protein MNB1B HMG1/2-like protein HMG1/2-like protein HMG1/2-like protein DNA-binding protein MNB1B high mobility group B protein 7 uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 11
bna03030 DNA replication 2
bna03410 Base excision repair 2
bna03450 Non-homologous end-joining 2
bna00240 Pyrimidine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 5
bra03430 Mismatch repair 3
bra03420 Nucleotide excision repair 2
bra03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
ath03020 RNA polymerase 4
ath03420 Nucleotide excision repair 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00071 Fatty acid degradation 4
ghi01212 Fatty acid metabolism 4
ghi04146 Peroxisome 4
ghi00061 Fatty acid biosynthesis 2
ghi00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 7
gma03018 RNA degradation 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 3
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03082 ATP-dependent chromatin remodeling 2
vvi00240 Pyrimidine metabolism 2
vvi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 2
ppo00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 2
mtr03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 4
sly03040 Spliceosome 4
sly04141 Protein processing in endoplasmic reticulum 3
sly03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00010 Glycolysis / Gluconeogenesis 2
nta00260 Glycine, serine and threonine metabolism 2
nta01200 Carbon metabolism 2
nta01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 3
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
nta03030 DNA replication 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03008 Ribosome biogenesis in eukaryotes 2
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 7
osa03010 Ribosome 6
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 6
osa03040 Spliceosome 4
osa03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 10
osa03440 Homologous recombination 3
osa03420 Nucleotide excision repair 3
osa03430 Mismatch repair 2
osa03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 8
zma00520 Amino sugar and nucleotide sugar metabolism 3
zma01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
zma03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 6
zma03420 Nucleotide excision repair 3
zma03430 Mismatch repair 3
zma03440 Homologous recombination 2
zma03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00380 Tryptophan metabolism 3
tae00630 Glyoxylate and dicarboxylate metabolism 3
tae01200 Carbon metabolism 3
tae04016 MAPK signaling pathway - plant 3
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03022 Basal transcription factors 2
sbi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03082 ATP-dependent chromatin remodeling 4
bdi03030 DNA replication 4
bdi03440 Homologous recombination 2
bdi03460 Fanconi anemia pathway 2
bdi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 5
bdi03082 ATP-dependent chromatin remodeling 4
bdi03440 Homologous recombination 2
bdi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 3
cre03410 Base excision repair 2
cre03420 Nucleotide excision repair 2
cre03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03030 DNA replication 4
cre03410 Base excision repair 2
cre03420 Nucleotide excision repair 2
cre03430 Mismatch repair 2
cre00510 N-Glycan biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106345995 111197968 106416143 103845936 103854899 838659 838658 829709 107920412 107922191 107890968 102577961 102619973 102630695 100305961 100305957 100499992 100246802 100257544 100247584 7474442 7488016 7494705 11405962 25481021 25485684 101257131 101247954 101247008 102599000 102583623 107808275 107760218 107781188 4336676 4330271 4344416 109944069 541987 541952 780567 123080756 123172882 123410844 123402298 123444045 110431028 110432329 110436389 100829543 100838667 100821521 5721401 5722933 5722029
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