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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106436448   light-mediated development protein DET1 
 ath-u.5   DET1   light-mediated development protein 1 / deetiolated1 (DET1) 
 gma-u.5   100801685   light-mediated development protein DET1 
 gma-u.5   100790158   light-mediated development protein DET1 
 gma-u.5   100785677   light-mediated development protein DET1 
 vvi-u.5   100264330   light-mediated development protein DET1 
 mtr-u.5   11442566   light-mediated development protein DET1 
 sly-u.5   Det1   light-mediated development protein DET1 
 osa-u.5   4326296   light-mediated development protein DET1 
 zma-u.5   100281541   light-mediated development protein DET1 
 zma-u.5   100273813   uncharacterized LOC100273813 

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Top 50 coexpressed genes to 106436448 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106436448 (bna-r.1 coexpression data)

CoexMap"106436448"


bnaLOC106436448 | Entrez gene ID : 106436448    
Species bna ath gma vvi mtr sly osa zma hvu cit bra ghi ppo sbi bdi nta tae cre sot
Paralog 1 1 3 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna04120 [list] [network] Ubiquitin mediated proteolysis (476 genes)
GO BP
GO:0032436 [list] [network] positive regulation of proteasomal ubiquitin-dependent protein catabolic process  (127 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (1065 genes)  IEA  
GO:0005975 [list] [network] carbohydrate metabolic process  (2192 genes)  IEA  
GO CC
GO:0031461 [list] [network] cullin-RING ubiquitin ligase complex  (275 genes)  IEA  
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:1990756 [list] [network] ubiquitin-like ligase-substrate adaptor activity  (2 genes)  IEA  
GO:0031625 [list] [network] ubiquitin protein ligase binding  (118 genes)  IEA  
Protein XP_013732870.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 4  (predict for XP_013732870.2)
Subcellular
localization
TargetP
other 3,  mito 3  (predict for XP_013732870.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106436448
ath-u.5
for
DET1
gma-u.5
for
100801685
gma-u.5
for
100790158
gma-u.5
for
100785677
vvi-u.5
for
100264330
mtr-u.5
for
11442566
sly-u.5
for
Det1
osa-u.5
for
4326296
zma-u.5
for
100281541
zma-u.5
for
100273813


Ortholog ID: 8531
Species bna bna bra ath ghi ghi cit gma gma vvi mtr sly sot nta nta osa zma zma tae tae hvu sbi bdi cre
Symbol LOC106423569 LOC106436448 LOC103858553 DET1 LOC107898887 LOC107949219 LOC102608186 LOC100785677 LOC100790158 LOC100264330 LOC11442566 Det1 LOC102577910 LOC107817062 LOC107785321 LOC4326296 LOC100273813 LOC100281541 LOC123097641 LOC123085700 LOC123443632 LOC8080887 LOC100845485 CHLRE_13g571560v5
Function* light-mediated development protein DET1 light-mediated development protein DET1 light-mediated development protein DET1 light-mediated development protein 1 / deetiolated1 (DET1) light-mediated development protein DET1 light-mediated development protein DET1 light-mediated development protein DET1 light-mediated development protein DET1 light-mediated development protein DET1 light-mediated development protein DET1 light-mediated development protein DET1 light-mediated development protein DET1 deetiolated 1-like protein light-mediated development protein DET1 light-mediated development protein DET1 light-mediated development protein DET1 uncharacterized LOC100273813 light-mediated development protein DET1 light-mediated development protein DET1 light-mediated development protein DET1 light-mediated development protein DET1 light-mediated development protein DET1 light-mediated development protein DET1 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 4
ghi04120 Ubiquitin mediated proteolysis 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 4
ghi04120 Ubiquitin mediated proteolysis 2
ghi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00970 Aminoacyl-tRNA biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00053 Ascorbate and aldarate metabolism 3
mtr00561 Glycerolipid metabolism 2
mtr00562 Inositol phosphate metabolism 2
mtr01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
sot03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
nta00970 Aminoacyl-tRNA biosynthesis 2
nta00350 Tyrosine metabolism 2
nta00360 Phenylalanine metabolism 2
nta00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03430 Mismatch repair 2
nta00350 Tyrosine metabolism 2
nta00360 Phenylalanine metabolism 2
nta00380 Tryptophan metabolism 2
nta00901 Indole alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 4
tae03082 ATP-dependent chromatin remodeling 3
tae03022 Basal transcription factors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 4
tae03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00230 Purine metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106423569 106436448 103858553 826609 107898887 107949219 102608186 100785677 100790158 100264330 11442566 778329 102577910 107817062 107785321 4326296 100273813 100281541 123097641 123085700 123443632 8080887 100845485 5719148
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