ATTED-II : GeneCoexpression result

Species	Gene	Description
bna-r.1	106437094	ribosomal RNA-processing protein 8-like
bna-r.1	106446168	ribosomal RNA-processing protein 8
bra-r.6	103864003	ribosomal RNA-processing protein 8
ath-u.5	AT5G40530	S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
ghi-r.1	107926066	ribosomal RNA-processing protein 8
ghi-r.1	107897908	ribosomal RNA-processing protein 8
cit-r.1	102614600	ribosomal RNA-processing protein 8
gma-u.5	100808860	ribosomal RNA-processing protein 8
gma-u.5	100788446	ribosomal RNA-processing protein 8
vvi-u.5	100249145	ribosomal RNA-processing protein 8
ppo-u.5	7467643	ribosomal RNA-processing protein 8
mtr-u.5	11428321	ribosomal RNA-processing protein 8
mtr-u.5	25497922	ribosomal RNA-processing protein 8
sly-u.5	101262065	ribosomal RNA-processing protein 8
sot-r.1	102581230	ribosomal RNA-processing protein 8
nta-r.1	107795429	ribosomal RNA-processing protein 8
nta-r.1	107768433	ribosomal RNA-processing protein 8
osa-u.5	4329847	ribosomal RNA-processing protein 8
zma-u.5	100193863	uncharacterized LOC100193863
tae-r.2	123144685	ribosomal RNA-processing protein 8
tae-r.2	123127580	ribosomal RNA-processing protein 8
hvu-r.1	123402449	ribosomal RNA-processing protein 8
sbi-r.1	8071651	ribosomal RNA-processing protein 8
bdi-r.1	100827804	ribosomal RNA-processing protein 8
cre-r.1	CHLRE_07g323450v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005730 [list] [network] nucleolus

(615 genes)

IEA

GO MF

GO:0008168 [list] [network] methyltransferase activity

(844 genes)

IEA

Protein

XP_013733482.3 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9

(predict for XP_013733482.3)

Subcellular
localization
TargetP

chlo 6, other 5

(predict for XP_013733482.3)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 106437094	bna-r.1 for 106446168	bra-r.6 for 103864003	ath-u.5 for AT5G40530	ghi-r.1 for 107926066	ghi-r.1 for 107897908	cit-r.1 for 102614600	gma-u.5 for 100808860	gma-u.5 for 100788446	vvi-u.5 for 100249145	ppo-u.5 for 7467643	mtr-u.5 for 11428321	mtr-u.5 for 25497922	sly-u.5 for 101262065	sot-r.1 for 102581230	nta-r.1 for 107795429	nta-r.1 for 107768433	osa-u.5 for 4329847	zma-u.5 for 100193863	tae-r.2 for 123144685	tae-r.2 for 123127580	hvu-r.1 for 123402449	sbi-r.1 for 8071651	bdi-r.1 for 100827804	cre-r.1 for CHLRE_07g323450v5

Ortholog

Ortholog ID: 10346

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

ribosomal RNA-processing protein 8-like

ribosomal RNA-processing protein 8

S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

ribosomal RNA-processing protein 8

uncharacterized LOC100193863

ribosomal RNA-processing protein 8

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03008	Ribosome biogenesis in eukaryotes	3
bna00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03020	RNA polymerase	2
bna03018	RNA degradation	2
bna00564	Glycerophospholipid metabolism	2
bna03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03008	Ribosome biogenesis in eukaryotes	2
bra03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03460	Fanconi anemia pathway	2
ghi03018	RNA degradation	2
ghi03040	Spliceosome	2
ghi03020	RNA polymerase	2
ghi03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03460	Fanconi anemia pathway	2
ghi03018	RNA degradation	2
ghi03040	Spliceosome	2
ghi03020	RNA polymerase	2
ghi03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00970	Aminoacyl-tRNA biosynthesis	3
cit00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
cit01240	Biosynthesis of cofactors	2
cit03018	RNA degradation	2
cit03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03008	Ribosome biogenesis in eukaryotes	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03040	Spliceosome	3
vvi03010	Ribosome	2
vvi03020	RNA polymerase	2
vvi03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00440	Phosphonate and phosphinate metabolism	2
mtr00564	Glycerophospholipid metabolism	2
mtr00565	Ether lipid metabolism	2
mtr03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03008	Ribosome biogenesis in eukaryotes	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03010	Ribosome	4
nta00240	Pyrimidine metabolism	2
nta01232	Nucleotide metabolism	2
nta03082	ATP-dependent chromatin remodeling	2
nta03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00240	Pyrimidine metabolism	2
nta01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03040	Spliceosome	3
zma04122	Sulfur relay system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03008	Ribosome biogenesis in eukaryotes	4
tae03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03018	RNA degradation	4
tae03008	Ribosome biogenesis in eukaryotes	3
tae03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	5
hvu03018	RNA degradation	3
hvu03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03040	Spliceosome	3
bdi01240	Biosynthesis of cofactors	2

Expression

Expression pattern

Entrez Gene ID^*

106437094

106446168

103864003

834051

107926066

107897908

102614600

100808860

100788446

100249145

7467643

11428321

25497922

101262065

102581230

107795429

107768433

4329847

100193863

123144685

123127580

123402449

8071651

100827804

5726610

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 106437094 (bna-r.1 coexpression data)

Top 50 enrichment test to 106437094 (bna-r.1 coexpression data)


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	2	1	1	2	1	2	1	1	2	1	1	2	1	1	2	1	1	1	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 106437094 (bna-r.1 coexpression data)

Top 50 enrichment test to 106437094 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**